Pseudomonas psychrophila: G5J76_05760
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Entry
G5J76_05760 CDS
T06988
Name
(GenBank) exodeoxyribonuclease VII small subunit
KO
K03602
exodeoxyribonuclease VII small subunit [EC:
3.1.11.6
]
Organism
ppsh
Pseudomonas psychrophila
Pathway
ppsh03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
ppsh00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
G5J76_05760
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ppsh03400
]
G5J76_05760
Enzymes [BR:
ppsh01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.6 exodeoxyribonuclease VII
G5J76_05760
DNA repair and recombination proteins [BR:
ppsh03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA exonucleases
G5J76_05760
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exonuc_VII_S
Phage_TAC_11
RACo_linker
Mce4_CUP1
Motif
Other DBs
NCBI-ProteinID:
QIE31792
LinkDB
All DBs
Position
complement(1282088..1282330)
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AA seq
80 aa
AA seq
DB search
MARKKASPDFEQSLADLQTLVERLENGELSLEDSLTAFEQGIRLTRDCQGALAQAEQKVQ
ILLERDGELAQEPFDAEQSE
NT seq
243 nt
NT seq
+upstream
nt +downstream
nt
atggcccgcaaaaaagcttcaccggatttcgaacagtcactcgctgacctgcaaacactg
gtcgagcgtctggaaaatggcgagctgtcgctggaagactctctgaccgccttcgaacaa
ggcatccgcctgacccgtgattgtcagggcgcattggcccaggccgagcagaaagtccag
atcctgcttgagcgtgatggtgagttggcgcaagagccttttgatgcggaacagtccgaa
tga
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