Pseudomonas psychrophila: G5J76_05860
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Entry
G5J76_05860 CDS
T06988
Name
(GenBank) DNA-3-methyladenine glycosylase
KO
K03652
DNA-3-methyladenine glycosylase [EC:
3.2.2.21
]
Organism
ppsh
Pseudomonas psychrophila
Pathway
ppsh03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
ppsh00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
G5J76_05860
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ppsh03400
]
G5J76_05860
Enzymes [BR:
ppsh01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.21 DNA-3-methyladenine glycosylase II
G5J76_05860
DNA repair and recombination proteins [BR:
ppsh03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
G5J76_05860
Prokaryotic type
G5J76_05860
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Pur_DNA_glyco
Motif
Other DBs
NCBI-ProteinID:
QIE35185
LinkDB
All DBs
Position
complement(1302173..1302835)
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AA seq
220 aa
AA seq
DB search
MPMMLPDAFFDRDAQLLARELLGKVIRHRVNGLWLSARIIETEAYYIVDKGSHASLGYTE
KRKALFLDGGHIYMYYARGGDSLNFSAHGPGNAVLIKSAYPWLDNLSGPDSLAQMQLNNP
DTQGNPRPEQKLCAGQTLLCKALGLKVPVWDAKCFDPERLWVDDVREKPSRIIQTSRLGI
PHGRDEHLMYRFVDADYAAYCTRNPLRRGQVEGQDYLIVK
NT seq
663 nt
NT seq
+upstream
nt +downstream
nt
atgccaatgatgctgccagatgcctttttcgaccgcgacgcccagcttcttgctcgcgaa
ctgctgggcaaagtcatccgccatcgggtcaacggcctgtggctcagtgcccggattatc
gaaaccgaagcctattacatcgtagacaagggcagccacgcgtcgctgggctacaccgaa
aaacgcaaggcgctgtttctggatggcgggcacatttatatgtactacgcccgtggcggc
gattctttgaacttcagcgcccatggccccggcaacgcggtactgatcaaatccgcctac
ccgtggctggacaacttgtcgggcccggacagcttggcgcagatgcaactcaacaaccct
gacacccaaggtaaccctcgccccgagcagaaactctgcgccgggcaaaccctgctctgt
aaggcactgggcctcaaagtccccgtttgggatgcaaaatgtttcgaccccgaacgttta
tgggtcgatgacgtcagagaaaaaccttcgcgaatcatccagacctctcgcctgggcata
ccccatggacgggacgaacatttgatgtaccgctttgttgacgctgattacgctgcgtat
tgcacacgaaaccccctacgccgcggtcaggtcgaggggcaggattatttgatagtgaaa
tga
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