Pseudomonas psychrophila: G5J76_06200
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Entry
G5J76_06200 CDS
T06988
Symbol
trmA
Name
(GenBank) tRNA (uridine(54)-C5)-methyltransferase TrmA
KO
K00557
tRNA (uracil-5-)-methyltransferase [EC:
2.1.1.35
]
Organism
ppsh
Pseudomonas psychrophila
Brite
KEGG Orthology (KO) [BR:
ppsh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
ppsh03016
]
G5J76_06200 (trmA)
Enzymes [BR:
ppsh01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.35 tRNA (uracil54-C5)-methyltransferase
G5J76_06200 (trmA)
Transfer RNA biogenesis [BR:
ppsh03016
]
Prokaryotic type
tRNA modification factors
Methyltransferases
G5J76_06200 (trmA)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
tRNA_U5-meth_tr
Methyltransf_25
Methyltransf_31
Methyltransf_4
Methyltransf_11
Methyltransf_12
Methyltransf_15
Cons_hypoth95
TRM5-TYW2_MTfase
MTS
RrnaAD
DREV
Ubie_methyltran
Motif
Other DBs
NCBI-ProteinID:
QIE31873
LinkDB
All DBs
Position
complement(1376768..1377856)
Genome browser
AA seq
362 aa
AA seq
DB search
MSALPFDSATYAVELEAKTQRLRELLAPFDAPEPQVFDSPLKHFRLRAEFRLWREGGERH
YAMFAQDDKRTPILIEEFPIASLRINQLMPQLKSAWKASAPLSHKLFQVEFQTTLAGDAM
VTLCYHRPLDEHWQTAAEQLAKDLDISVIGRSKGKRVVIGRDHVVEALEVAGRTFTYQQP
EGAFTQPNGTVNQKMLNWAYEALGERSDDLLELYCGNGNFTLPLATRVRKVLATEISKTS
VYAALNNLRDNAVDNVTLVRLSAEELTEALNEVRPFRRLQGIDLKSYEFGSVFVDPPRAG
MDPDTCELTRRFDNILYISCNPATLAENIAQLHDTHRIERCAVFDQFPWTHHMESGVLLV
RR
NT seq
1089 nt
NT seq
+upstream
nt +downstream
nt
atgagtgctttgccgtttgattctgctacctacgccgttgagcttgaggccaagacccag
cgtctgcgcgagttgctggcgccattcgatgcgccagaaccccaggtgttcgattcgcct
ctgaagcattttcgtctgcgggccgaatttcgcctgtggcgcgaagggggcgagcgtcac
tacgccatgttcgcccaggatgacaagcgcacgccgatcctgatcgaagagtttccgatt
gccagcttgcgcatcaaccaattgatgccgcaactcaagtcggcctggaaagccagcgcc
cccctgagccacaagctgttccaggtggagttccagaccaccctggcaggcgatgcgatg
gtcactttgtgctatcaccgcccgctggacgagcactggcaaaccgctgccgagcagctg
gccaaagacctcgatatcagcgtgatcggccgctccaagggtaaacgtgttgtgatcggc
cgcgatcatgtcgtcgaagcgctggaagtggcgggtcgcaccttcacctaccaacagcct
gaaggcgcgttcacccagcccaacggcacggtcaaccagaagatgctcaattgggcatac
gaagcattgggcgagcgttcggatgatttgcttgagctgtattgcggcaacggcaatttc
accctgccactggccactcgcgtgcgcaaagtgctggccaccgaaatcagcaagacctcg
gtgtatgccgcgctcaacaacttgcgcgacaacgctgtggataacgtcacgctggtacgt
ttgtcagccgaagaactgaccgaagccctgaatgaagtgcgtccgttccgtcgtttgcag
ggcatcgacctgaaaagctacgagttcggcagcgttttcgttgacccgccgcgtgcgggc
atggaccctgacacctgcgaactgacacgccgcttcgataacatcctgtatatctcgtgc
aaccctgcaacattggccgagaacatcgcccaactgcacgatactcaccggattgagcgc
tgcgcagtatttgaccaattcccgtggactcaccacatggaatcgggcgtgttgctggtt
cgccggtaa
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integrated database retrieval system
