Pseudomonas psychrophila: G5J76_06265
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Entry
G5J76_06265 CDS
T06988
Symbol
radA
Name
(GenBank) DNA repair protein RadA
KO
K04485
DNA repair protein RadA/Sms
Organism
ppsh
Pseudomonas psychrophila
Brite
KEGG Orthology (KO) [BR:
ppsh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ppsh03400
]
G5J76_06265 (radA)
DNA repair and recombination proteins [BR:
ppsh03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
G5J76_06265 (radA)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ATPase
AAA_25
Zn_ribbon_LapB
ChlI
Lon_C
DnaB_C
AAA_16
AAA_22
AAA_24
AAA
GvpD_P-loop
RecA
SLFN-g3_helicase
Rad51
nSTAND3
AAA_14
DUF7125
NTPase_1
ABC_tran
MCM
AAA_5
zf-C2H2_6
AAA_29
Motif
Other DBs
NCBI-ProteinID:
QIE31886
LinkDB
All DBs
Position
1390426..1391793
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AA seq
455 aa
AA seq
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MAKPKRIYGCTECGATFPKWAGQCGECGVWNTLVETIVESGAAAPPSGRTGWTGQQAQIK
TLAEVSIAEIPRFSTASGELDRVLGGGLVDGSVVLIGGDPGIGKSTILLQTLCQMATRMP
ALYVTGEESQQQVAMRARRLGLPQDQLKVMTETCIENIIATAKLEKPKVMVIDSIQTIFT
EQLQSAPGGVSQVRESAALLVRYAKSSGTAIFLVGHVTKEGALAGPRVLEHMVDTVLYFE
GESDGRLRLLRAVKNRFGAVNELGVFGMTDKGLKEVSNPSAIFLTRAQEEVPGSVVMATW
EGTRPMLVEVQALVDDSHMSNPRRVTLGLDQNRLAMLLAVLHRHGGIPTHDQDVFLNVVG
GVKVLETASDLALMAAVMSSLRNRPLPHDLLVFGEVGLSGEVRPVPSGQERLKEAAKHGF
KRAIVPKGNAPKESPPGLKVIGVTRLEQALDALFE
NT seq
1368 nt
NT seq
+upstream
nt +downstream
nt
atggccaagcccaagcgcatttacggctgcaccgagtgcggcgcaacctttcccaagtgg
gcagggcagtgcggcgagtgcggcgtctggaacaccctggtcgaaaccatcgtagaaagc
ggggccgcagcgccgcccagtggccgtaccggctggaccgggcaacaagcccagatcaaa
accctggccgaagtcagcattgcagaaatcccgcgcttctccaccgcgtccggcgagctg
gatcgggtgctcggtggcggcctggtcgatggctcggtggtgttgatcggcggtgacccg
ggtatcggtaaatccacgatcttgctgcaaaccttgtgtcagatggcgacgcgcatgcct
gcgctgtatgtcaccggcgaagagtctcagcagcaagtggccatgcgcgcccgccgcctg
gggctgccgcaggatcagctcaaggtgatgaccgaaacctgtatcgaaaacatcatcgcc
accgccaagcttgaaaagcccaaggtcatggtgatcgactcgatccagaccatcttcacc
gagcaactgcagtcggcaccgggtggcgtgtcccaagtgcgagaaagtgcggcgttactg
gtgcgctatgccaaatcgagcggtacggcgatttttctggtgggccacgtgaccaaagag
ggcgcgctggccgggccgcgcgtgctggagcatatggtcgacaccgtgctgtatttcgaa
ggcgagtctgacgggcgcttgcgtctgttgcgcgcagtgaaaaaccggtttggcgcagtc
aacgaactgggtgtgttcggcatgactgataaaggcctgaaagaagtctccaacccgtca
gctattttcctgacccgtgcccaagaagaagtgccgggtagcgtcgtcatggccacctgg
gaaggcactcgcccgatgctggtggaagtgcaggcgctggtggacgacagccatatgtcc
aacccgcgccgtgtgaccctcggcctggatcagaatcgtctggccatgctgctggccgtc
ttgcatcgtcatggtggtattcctactcatgatcaggatgtattccttaacgtggtgggc
ggggtcaaggtgttggaaacagcgtcggacctggcgctgatggcggccgtgatgtcgagt
ttgcgcaatcgtccgctgccccacgacctgctggtattcggagaagtgggtctgtcgggt
gaggtgcgtccggtgccaagtggccaggagcgcctaaaagaagccgccaagcacggcttc
aaacgcgccatcgtgcccaagggcaacgctccaaaagagtctccgccgggcttgaaagtc
atcggagtgacccgtctggagcaagcgctggatgcgctgtttgagtag
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