Pseudomonas psychrophila: G5J76_06310
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Entry
G5J76_06310 CDS
T06988
Name
(GenBank) serine hydroxymethyltransferase
KO
K00600
glycine hydroxymethyltransferase [EC:
2.1.2.1
]
Organism
ppsh
Pseudomonas psychrophila
Pathway
ppsh00260
Glycine, serine and threonine metabolism
ppsh00460
Cyanoamino acid metabolism
ppsh00630
Glyoxylate and dicarboxylate metabolism
ppsh00670
One carbon pool by folate
ppsh00680
Methane metabolism
ppsh01100
Metabolic pathways
ppsh01110
Biosynthesis of secondary metabolites
ppsh01120
Microbial metabolism in diverse environments
ppsh01200
Carbon metabolism
ppsh01230
Biosynthesis of amino acids
ppsh01240
Biosynthesis of cofactors
ppsh04981
Folate transport and metabolism
Module
ppsh_M00975
Betaine degradation, bacteria, betaine => pyruvate
Brite
KEGG Orthology (KO) [BR:
ppsh00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
G5J76_06310
09102 Energy metabolism
00680 Methane metabolism
G5J76_06310
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
G5J76_06310
09106 Metabolism of other amino acids
00460 Cyanoamino acid metabolism
G5J76_06310
09108 Metabolism of cofactors and vitamins
00670 One carbon pool by folate
G5J76_06310
09150 Organismal Systems
09154 Digestive system
04981 Folate transport and metabolism
G5J76_06310
Enzymes [BR:
ppsh01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.2 Hydroxymethyl-, formyl- and related transferases
2.1.2.1 glycine hydroxymethyltransferase
G5J76_06310
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GFIT
Motif
Pfam:
SHMT
Aminotran_1_2
Beta_elim_lyase
Cys_Met_Meta_PP
Aminotran_5
DegT_DnrJ_EryC1
Motif
Other DBs
NCBI-ProteinID:
QIE31893
LinkDB
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Position
complement(1400468..1401721)
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AA seq
417 aa
AA seq
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MFSRDLTLAKFDADLFAAMEQEAQRQEEHIELIASENYTSPAVMEAQGSVLTNKYAEGYP
GKRYYGGCEYVDVVEQLAIDRAKELFGADYANVQPHAGSQANSAVYLALLSAGDTILGMS
LAHGGHLTHGASVSSSGKLYNAIQYGIDANGLIDYDEVERLAVEHKPKMIVAGFSAYSQI
LDFPRFRAIADKVGAYLFVDMAHVAGLVAAGVYPNPVPFADVVTTTTHKTLRGPRGGLIL
AKANADIEKKLNSAVFPGSQGGPLEHVIAAKAVCFKEALQPEFKAYQQQVVKNAQAMASV
FIERGFDVVSGGTENHLFLLSLIKQDISGKDADAALGKAFITVNKNSVPNDPRSPFVTSG
LRFGTPAVTTRGFKVEECRELATWICDILADINNEAVIDAVREKVKAICAKLPVYGN
NT seq
1254 nt
NT seq
+upstream
nt +downstream
nt
atgttcagccgtgatttgacacttgccaagttcgacgccgacctttttgccgccatggag
caagaagctcagcgccaggaagaacatattgagctgatcgcttcggaaaactacaccagc
ccagcggtcatggaagctcaaggctcggtcctgaccaacaaatacgccgagggttacccg
ggcaagcgctactacggcggctgcgaatacgtagacgtggttgagcaactggctatcgac
cgtgcaaaagaactgtttggcgccgattacgccaacgttcagccacacgccggttcccag
gccaacagcgctgtatacctggccctgttgtcggctggcgacaccatcctgggcatgagc
ctggcacacggtggtcacctgacccacggcgccagcgtgtcgtcctcgggcaagctgtac
aacgccatccagtacggcatcgatgccaacggcctgatcgactacgacgaagtagagcgt
ctggcagttgaacacaagccaaaaatgatcgtggccggtttctctgcctactcgcagatc
ctggacttcccgcgcttccgcgctatcgctgacaaggttggcgcctacctgttcgtagac
atggctcacgtagccggtctggtcgctgctggcgtttaccctaacccggttccgtttgct
gacgtagtaaccaccacgactcacaaaaccctgcgcggtccacgtggcggcctgatcctg
gccaaggccaacgccgacatcgagaagaagctgaactccgcagtcttcccgggttcgcaa
ggcggcccactggagcacgtcatcgccgccaaggccgtgtgcttcaaagaagctctgcaa
ccagagttcaaggcttatcagcaacaagtagtcaaaaacgcccaggccatggcctcggta
tttatcgagcgcggctttgacgtggtatcgggcggtactgaaaaccacctgttcctgctg
tcgctgatcaagcaggacatctcgggtaaagacgccgacgccgcactgggcaaagcgttc
atcaccgttaacaaaaactccgtaccgaacgatccacgctccccgttcgtgacctcgggt
ctgcgtttcggtactccagctgttaccactcgtggcttcaaggttgaagaatgccgtgaa
ctggccacttggatctgcgacatcctggctgatatcaacaacgaagccgttatcgacgcc
gttcgcgagaaagtcaaagccatctgcgccaagctgccggtctacggcaactga
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