Pseudomonas psychrophila: G5J76_07470
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Entry
G5J76_07470 CDS
T06988
Symbol
der
Name
(GenBank) ribosome biogenesis GTPase Der
KO
K03977
GTPase
Organism
ppsh
Pseudomonas psychrophila
Brite
KEGG Orthology (KO) [BR:
ppsh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
ppsh03009
]
G5J76_07470 (der)
Ribosome biogenesis [BR:
ppsh03009
]
Prokaryotic type
GTPases
G5J76_07470 (der)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
MMR_HSR1
FeoB_N
KH_dom-like
GTP_EFTU
Dynamin_N
AIG1
RsgA_GTPase
Roc
AAA_22
ABC_tran
Ras
DUF5906
AAA_24
AAA_18
NTPase_1
NOG1
SRPRB
cobW
AAA_14
RHD3_GTPase
Motif
Other DBs
NCBI-ProteinID:
QIE32100
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All DBs
Position
1639312..1640781
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AA seq
489 aa
AA seq
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MVPVIALVGRPNVGKSTLFNRLTRTRDAIVGDLSGLTRDRQYGEAKWQGRSYILVDTGGI
SGDEHGMDEKMAEQSLLAIEEADVVLFLVDAKAGFTAADQMIGEHLRKRNKRSYVVANKV
DNIDPDMARAEFAPLGMGDAIPIAGAHGRGITQMLEIALSNFPRDEEEPEDGEEEVVLEG
EEAKRIPGPSEKDGIKIAIIGRPNVGKSTLVNRMLGEDRVIVYDQPGTTRDSIYIPFERN
DEKYTLIDTAGVRKRGKIHEEVEKFSVVKTLQAIKDANVVIFVMDAREGVVDHDLNLLGF
ALEAGRALVIAINKWDGMTPSERDFVKVELTRRLFFVDFADIHFISALHGTGVGNLYQSV
QNSFKSAVTRWPTNRLTQILEDAVSEHAPPMVNSRRIKLRYAHLGGANPPIIVIHGNQVE
KVPKSYVRYLENTYRRVLKLVGTPIRIEFKGGENPYEGNKNSLTDRQVNKKRRMMSHHKK
AEKNRKDKR
NT seq
1470 nt
NT seq
+upstream
nt +downstream
nt
atggttcccgtaatcgccctggtgggccgaccaaacgtcggcaagtccaccttgttcaac
cgcctgaccaggactcgtgacgccatcgttggcgacttgtccggtctgacccgtgatcgc
caatacggtgaggccaagtggcaagggcgttcctacattctggtcgacaccggcggtatc
tccggtgacgagcacggtatggacgaaaagatggccgagcagtcgctgctggctatcgaa
gaagctgatgtcgttctgttcctggtagatgcaaaagcgggtttcacagccgctgaccag
atgatcggcgaacaccttcgcaaacgtaacaagcgctcctacgtagtggccaacaaggtt
gataacatcgacccggacatggctcgcgccgagttcgcaccactgggcatgggcgacgcg
attccaatcgccggtgctcacggccgtggtatcacacaaatgctggaaattgccctgagc
aacttcccgcgtgacgaagaagagccagaagacggtgaagaagaagtcgttctcgaaggc
gaggaagccaagcgcattcctggcccaagcgagaaagacggcatcaagatcgccatcatc
ggtcgccctaacgttggcaagtcgacactggtcaaccgcatgctcggtgaagaccgtgtc
atcgtttatgatcagccaggcactacccgcgacagcatctacatcccgtttgagcgtaac
gacgagaagtacacgctgatcgacaccgcaggtgtgcgcaagcgcggcaagatccacgaa
gaagttgaaaaattctccgtggtcaaaaccctgcaagcgatcaaagacgccaacgtggtg
atctttgtgatggacgcccgcgaaggcgtggttgaccacgaccttaacctgttgggcttt
gcgctggaggccggtcgggctctggtcattgcgatcaacaagtgggacggcatgaccccg
agcgagcgcgacttcgttaaagtcgagctgactcgtcgcctgttcttcgtcgactttgcc
gatattcactttatctcggcactgcacggcactggcgtgggcaacctgtaccaatcggtg
cagaactccttcaagtcagcggttacccgttggccgaccaaccgtctcacccagattctg
gaagatgcggtcagcgagcacgcgccaccgatggtcaacagccgccggatcaagctgcgc
tatgcccacttgggtggtgccaacccgccgattatcgtgatccacggtaaccaggttgag
aaggttccgaagtcttacgtccgttatctcgaaaacacctaccgtcgtgtcttgaagttg
gtcggtacgccgatccgcatcgagttcaaaggtggcgagaacccgtacgaaggcaacaag
aactcgctgaccgaccgtcaggtcaacaagaaacgccgcatgatgtcgcaccacaagaaa
gccgagaaaaaccgcaaagacaagcgctga
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