Pseudomonas psychrophila: G5J76_08530
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Entry
G5J76_08530 CDS
T06988
Name
(GenBank) hypothetical protein
Organism
ppsh
Pseudomonas psychrophila
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
NEL
LRR_4
LRR_8
AbrB_C
Motif
Other DBs
NCBI-ProteinID:
QIE32302
LinkDB
All DBs
Position
1883842..1890450
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AA seq
2202 aa
AA seq
DB search
MTTLSPPVSGRAPVLLSKTQWAQNEALSFIASIVQSNFALLDDEQKNSYPQLHRKAQADL
EAVETEIKRIKDTFKSSQIAALKRELKTLTGVDINPEQARIYTRYRENIHEDFNEYLSRI
SGDKPAREPRFTFSPPRTTRALDESRFIERVHSVTLWDAACENFSYRTDSRLLKPYSYEQ
ASHIDYAEGLNGQAAGPFIAIARRLDFGVQLNRLLEQAAGPAGSLMRLAVDAAKSSIEFE
LLEALRNNTVSKVQRRDHELLLGMLKGDSSPHLWPVSMGLARKHRFIHPPVDTGADGRLL
FGSQSGYDFIGKGSVALPLFIIKVPEVMGVFSYFPNRLGGAVLWHTNVGAVFQQFVQQLK
QDHSKGQLGWFVRQLALKDLGFFNKLLGAEPRPEGLSWLAGVLYDSFRSTFPEPDLDSLQ
LSVEMSAAGSPLMAYAMAERHMQRYRSNLNMLATPKSEQDWQAFKEALTDIGSEVLSLLT
TPMPGGVLGLNKIMQGAIFGSLAYSVVQGVKEAGKGEASTFAGALADSMDMLISGRLIGV
ASKAHRQRMNALWNRVGQPIKVIHQDGRTELWDRQLSPYSQVDATLLDTLTLNHEGIYPH
MGKAYAKVQEGDKTLAIEVILDPVHKHYVLKAVDAQVYRPPVVFDTVTKVWRLALDDVQS
LSDVQLLQRMLVVDTQSAARGDIERMLSITATSRQQLQDTWQGQPIPGPLADGVRRLMAD
RLIEHIVTDLPLRVALPVSAHRAVLSVLTQLDHWPVEAVLDVLNPQGTVIESYGKDYRPG
TPLNRIQVKRLDHGAYAAKDDLGQGSRQVHQLLALVLDQLPETSMLGREDSPGRDRATRI
TAIGEQVCDLAREDKTLLFKALTGLEGHARNDPIASADAGRKYLPLVCPPISESTTPLLA
KLHELNPSLSIESLESLLVAHPFNTYQVSRALEHNAQPLPFASAVDQLEIKLRVDQALDG
IYHPRAHTRDMDSWAREFARGALHDKLNRRLVVTDAASVYTATGADDTSVVLRHHGNGSY
AAFDYRRQESITFSSTPDSFYLALGWLLKPQERSQLGMQGISITGLRKALGDAMLASRQA
DGRVSLWDKSTAQYQRAVALPLDQPPGELGLYEIEGKHHLSLYGVVYQVELDAKLHKWRL
KHPDKVGVNTPLLEHNGDGAWRLKSENPLHWSRLQLLRRLRAEPQSVSDETAQAIMAVSN
TDEGVLRQVHMNNLTPPPLLIDTWKRFGIERDIRGFVKKMQAAHTLPDARTDLQLLLMQS
MPGWPRDKVLQVVDAQGNTLQQYGTDLGSHVPRIRILRDDTHNGSFLRALLSQMNEGDTR
VLLGDYTPVIEARMLVLAKKIAAHALEREVDVFNTLYQSLEQSTDAHVVVVQNKYPQLPK
SVINNLLRHTTGREKAHFLDQGLIPPRLAEQITWTSREVRLARAYEGLFMEATATPDSER
LMLHMLESLSGWPANVRIEVRRNDVNGQLLDSIGSAGGRSPRRLVRRDGRYRAYDQDGQA
LNAPSTTDNNLLASILHVLNEAERGGIAIKDVNDTRVLAKKISDLAIAHRSQVKTLLGLE
PPNHRIEPPMKVDTSFVAYPFFLNQGQSNHPLDLVRQVRSLYPRMNYVENLRFLDALGGT
DASRRAEVERLRVELETLLGQLASWERIQLYPTAGTHVAMALPGERRRVCELIERAWRRD
TETVSAQASLDGGYLLVFNGIQAGDLPALTGDFSHIRGLHMDNMNLHRGSNEFLSSFSQL
HVLTMFDNRLRSLPPAIANMPRLTTLNLSYNNIVLSPESAQQLAGCTALQALRLDNNSLG
ITPDVSRMTALRYLNLSHTGITSWPAGLQGLTHLEEVNLRHNNIVTIEQTLFEAPGANAV
NSVTRIHGNPISAESRDRLIDYWGRTGIHMGYIPAVDHAHAFHEARYPIGDISPWLSSGL
SAVQRQQKLQQWALLKGFEGKANDLLKLLSGLAQAQADMSAHSRLALHDRVWTLIDRLLA
DTALRDLLFQGVHYDATCRDGVMVLLDNLEVQVLIHQAENLIGANVRETQHLNLAKGLFR
LRQVDQIADAVIAERLRLGGHPDVAEIQLFYRIQLAEALGLPIQTRSMFSAPIAGISAAQ
ITEAKDSILAMDAGPALKHSIMQEVLWRNFLHAKHTARFEAIEEQYQKDYTKLSEDSELS
DDLQLLRGAELTDSRDQKLNLLVEELTDAALQGADQTPGGPL
NT seq
6609 nt
NT seq
+upstream
nt +downstream
nt
atgacaaccctgtcccccccagtgagcggtagagcacctgtactcctgagcaaaacccaa
tgggcgcaaaatgaagcgctgtcttttatcgcctccatcgtgcagtccaactttgccctt
cttgatgatgagcagaaaaacagctatccccaactccatcgcaaggcccaggcagacctc
gaagcggtcgaaacggagatcaaacggatcaaggacaccttcaaatccagccagatcgcc
gcgctcaaacgagaactgaaaaccctgacgggcgttgatatcaaccccgagcaagcccgc
atctacacgcgctatcgtgaaaatatccacgaagacttcaatgaatacctctcacgcatc
agtggcgacaaacctgcacgcgaaccccggttcaccttcagcccccctcgcacgactcgc
gcgctggatgaatcaagatttatcgaacgcgttcactcggtcacgctgtgggacgccgct
tgcgagaacttcagctatcgaaccgattccaggctgctcaagccctacagctatgagcag
gccagtcacatcgattatgccgagggcttgaatggccaagcggcagggccgtttatcgcg
atcgcgcgcagactggattttggcgtgcagttgaaccgcttgctggagcaggcagccggg
ccggctgggtccttgatgcggctggcagtagacgcagccaaatccagcattgaattcgag
ttgctggaggcattgcgaaataacaccgtctcgaaagttcagcgcagggaccatgagtta
ttgctcggcatgttgaagggggactcgtcaccccacctatggcccgtctcgatggggctt
gccaggaagcacaggtttatccacccgcctgtggacacgggtgccgacggcaggctgctg
ttcggttcgcaaagtggctatgacttcatcggaaaaggcagcgtggcgctgccgcttttc
atcatcaaggtgcccgaagtcatgggtgtcttcagctactttcctaatcggctggggggt
gcagttttatggcatacgaacgtaggtgccgtgttccagcagttcgtgcaacaactcaag
caggatcacagcaaggggcagctgggctggtttgtcaggcaactggcgctcaaagacctg
gggttctttaacaaactgttgggggctgagccaaggcccgaagggctgtcgtggctggcg
ggggtgttgtatgacagttttcgcagcacgttccccgaacctgacctggacagtttgcaa
ctgtctgtcgaaatgtctgcggctggatcgccactgatggcgtacgcaatggccgagcgg
cacatgcagcgctaccgctccaacctgaacatgctggccacccccaagtccgaacaggac
tggcaggcgttcaaggaggcattgaccgatatcggcagtgaggtgttgagcctgctcacc
acgcccatgcccggaggcgtgttggggctcaataaaatcatgcagggtgccatcttcgga
tcgctggcctacagcgttgtgcagggggtcaaagaagccggaaaaggggaggccagcacc
ttcgccggggcattggcggactcgatggatatgctcatcagcgggcggttgatcggcgtt
gcaagcaaggctcatcgacaacgcatgaacgcactctggaaccgtgtggggcagccgatc
aaggtcattcaccaggacggcaggaccgagttgtgggatcggcagttgagtccctattcg
caagtggatgccaccctgctggacacgttgacgctcaaccatgaaggtatttatccgcac
atgggcaaggcgtatgccaaggtccaggagggcgacaagaccctggccatcgaagtcatc
cttgaccccgtccacaagcattacgtgctcaaggccgttgatgctcaggtgtaccggccg
cctgtggtattcgataccgtgaccaaggtctggcgtctggcgctcgatgatgttcagagc
ctgagcgacgttcagttgttgcagcgcatgctggtggtcgatacccagagcgctgcgcgt
ggggatatcgagaggatgctgagcattaccgcgacttctcgtcagcagttgcaggacacc
tggcaaggccagcccataccgggcccgctggccgacggggtacgtcggctaatggctgat
cgactcatcgagcacatcgttaccgacttgccactgcgcgtggcattaccggtcagcgcc
caccgcgcggtactgagtgtcttgacccaattggaccactggccggtggaggcagtgctg
gatgtactcaatccacaagggacggtgattgaatcctatggcaaggattaccgccctggt
acgccgttgaatcgtattcaggtcaagcgtctggatcatggtgcctatgcggccaaggac
gatctcggccaaggcagtaggcaggtgcatcaattgctcgccttggtactcgaccaatta
cccgagacatcaatgctggggcgcgaagacagtcctggtcgtgacagggccacgcggatt
acagccattggcgagcaagtttgcgatctggcccgagaggacaaaacgcttttattcaag
gccctcactgggctcgaagggcatgcgcgcaacgacccgattgccagcgcagatgcaggc
cgcaagtacttgccgctggtgtgcccgccgatctcggaaagcactacgccactgctcgcc
aaacttcatgagctaaacccctcgttgtctatcgagagtctggagtcactgctggttgcg
catccattcaatacgtaccaggtgagccgtgcccttgagcacaacgcccagcccctaccg
tttgccagcgcggtggatcaactggagataaaactgcgtgtcgatcaggctctggatggt
atttatcacccccgtgcccatacccgggatatggatagctgggcgcgggagtttgcgcgc
ggtgccctgcacgacaagctcaatcgcaggctggtggtcaccgatgctgcgagcgtttat
acagccactggagctgacgacaccagtgtcgtgctgcgccatcacggcaatggctcgtac
gcagcgtttgattaccgtcgtcaagagagcatcacgttcagctcaacccctgacagtttt
tatctggcgctgggttggttgctcaaacctcaagaacgctcacagctgggcatgcagggc
atcagcatcacgggtctgcgcaaggccttgggcgatgcaatgctggccagccgtcaggca
gatgggcgcgtcagcctttgggacaaatccacggcccaataccagagggcggtggcgtta
ccccttgatcagccgccgggggagctggggctttacgagatagagggtaaacaccatctg
tcgctttacggcgtggtgtatcaggttgaactcgatgccaagctgcacaaatggcgactc
aagcatccggataaagtcggagtcaatacgccgctgctggagcacaacggcgatggcgca
tggcgactgaaaagcgagaatccgctgcactggtccaggctccagctcttgcgaagactg
cgcgccgagcctcagtccgtgagcgatgagacagcgcaggcaatcatggccgtgagcaac
accgatgaaggggtgttgcgccaggtacacatgaacaacctgaccccgccacccttgctg
atcgacacctggaaacgcttcgggattgaacgggacatccgcggttttgtgaagaaaatg
caggcagctcacaccctgcctgatgcccgtaccgacctgcagctgttattgatgcaaagt
atgcccggctggccacgggacaaagtactgcaagtggtggacgcgcaaggcaataccctg
cagcagtacggcactgatcttgggagtcacgtgccacgcatcagaatcttgcgcgatgac
acccacaacggaagctttttgcgtgccttgctttcgcagatgaatgagggcgatacccgg
gttttactgggggattacacgccggtgatcgaagcacgaatgctggtattggctaaaaaa
atcgccgctcatgccctggagcgcgaagttgatgtgttcaacacgctgtaccagagcctg
gagcagagcactgatgcccatgtagttgtggttcaaaacaaatacccgcagctccccaaa
agcgtcatcaacaatctgctcaggcacaccacaggccgcgaaaaagctcacttccttgat
caagggctaatcccgccacggctggccgagcaaattacctggacctccagagaggtacgc
ctggcccgggcttatgagggcttgttcatggaggctacggcaactcccgacagcgaaagg
ctcatgttgcatatgcttgagtccctgtcgggctggcccgcaaatgtgagaatcgaggtg
cgccgcaatgacgtgaacggtcagttgctcgacagcattggatcagccggtgggcgctca
ccccgcaggctggtcaggcgtgacggtcgctaccgggcttatgatcaggatggccaggca
ctcaatgccccatcaacgacggataacaatctgctcgcgtcgatcttgcatgtgttgaac
gaggccgagcgtgggggcatcgcgatcaaggatgtaaacgatacccgggtcctggccaaa
aaaatcagcgacctggccatcgcccacagaagccaggtcaagaccctgttggggctggag
ccgcctaaccaccggattgagccgccgatgaaagtcgatacctcgtttgtcgcctatccc
ttctttctcaatcaagggcagtcaaaccatcctctggacctggtccgtcaggtgagaagc
ctgtacccgcggatgaattacgtcgaaaacctgcgttttctggacgcgctgggcggcacc
gatgcgagcaggcgggcagaggtcgagcggttgcgggtggaacttgagacgctgctaggg
caattggcgagttgggagcgcatccagctttaccctacggcgggaacccatgttgcgatg
gcacttcccggggagcggcgtagggtgtgtgagctgatcgaacgcgcctggcgcagagat
acagagactgtttcggcgcaagcaagccttgatggcggctacttactggtgttcaacggt
attcaggctggcgacctgccggcgctgacaggagatttcagccatatcagggggctgcac
atggataacatgaacctgcaccgaggatcgaatgagtttttgagcagtttcagccagttg
catgtgctgacgatgtttgacaatcgattgagaagcctgccacctgcgattgccaacatg
ccccggctgacgacgctcaacctgtcctacaacaacattgtgctgagccctgaaagtgcg
caacagctggcgggttgcacagcgcttcaagcgcttcgccttgataacaactcgttaggc
atcacgccggacgtaagccggatgacggcgttacgctatttgaacttatcacataccgga
attacgagctggcctgcagggttgcaggggctgacgcaccttgaagaagtcaatctgcgg
cataacaatattgtcactatcgagcagacgctgtttgaggcccccggtgccaacgcggtc
aacagcgtgacccggattcacggtaaccctatatccgccgagagccgtgaccgattgatc
gactactggggcagaaccggcatccatatgggctacatcccggcggttgaccatgcccat
gcctttcacgaggcccgctacccgataggtgatatcagtccgtggttatcctcgggcctg
agtgctgtgcaacggcagcaaaaactccagcaatgggccttgctcaaggggtttgagggc
aaggcaaacgacttgctcaaattgctgtcgggtctggcgcaggctcaagcggatatgtcg
gctcatagccggttggcgctgcacgaccgtgtgtggacattgatcgatcgcctgctggcg
gacacagccttgcgcgacctgctgtttcagggcgttcactatgatgcaacgtgccgggac
ggtgtcatggtgctcctcgacaacctggaggtgcaggtgctcattcatcaggctgaaaac
ctgatcggtgcgaacgtgcgcgagacacagcatttaaatctggccaaggggttgtttcgt
ctcaggcaagtcgaccagatcgcagacgccgttatcgccgagcgcttaaggctgggaggc
catcccgatgtggctgaaatacagctgttttaccgaatccaactggccgaagccctaggc
ttgccgattcagacccggtcgatgttttctgcgccgatagcaggtatttctgcggcgcaa
atcaccgaggccaaagacagcattctggccatggacgctggccccgcgctcaaacactcg
atcatgcaggaggttttgtggcgcaactttcttcacgccaagcataccgcccgtttcgag
gccatcgaggagcaataccagaaggactacacaaagctctcagaggacagcgaactgtct
gacgacttgcagttactccggggggcagaactgaccgatagcagagatcagaagctcaat
ctattggttgaagaactgacagacgcggcactccagggcgctgatcaaacccctggcggg
cctctgtaa
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