Pseudomonas psychrophila: G5J76_09575
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Entry
G5J76_09575 CDS
T06988
Symbol
kdsB
Name
(GenBank) 3-deoxy-manno-octulosonate cytidylyltransferase
KO
K00979
3-deoxy-manno-octulosonate cytidylyltransferase (CMP-KDO synthetase) [EC:
2.7.7.38
]
Organism
ppsh
Pseudomonas psychrophila
Pathway
ppsh00541
Biosynthesis of various nucleotide sugars
ppsh01100
Metabolic pathways
ppsh01250
Biosynthesis of nucleotide sugars
Module
ppsh_M00063
CMP-KDO biosynthesis, ribulose-5P => CMP-KDO
Brite
KEGG Orthology (KO) [BR:
ppsh00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 Biosynthesis of various nucleotide sugars
G5J76_09575 (kdsB)
09180 Brite Hierarchies
09181 Protein families: metabolism
01005 Lipopolysaccharide biosynthesis proteins [BR:
ppsh01005
]
G5J76_09575 (kdsB)
Enzymes [BR:
ppsh01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.38 3-deoxy-manno-octulosonate cytidylyltransferase
G5J76_09575 (kdsB)
Lipopolysaccharide biosynthesis proteins [BR:
ppsh01005
]
Lipid A
G5J76_09575 (kdsB)
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GFIT
Motif
Pfam:
CTP_transf_3
NTP_transf_3
DUF2064
Motif
Other DBs
NCBI-ProteinID:
QIE32486
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Position
2106160..2106924
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AA seq
254 aa
AA seq
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MIPVFTVVIPSRFASTRLPGKPLQMIAGKPMVQHVWEQACKSSAQRVVVATDDARIVDAC
KAFGAEVLLTRTDHESGTDRLAEVATQLGLASDAIVVNVQGDEPMIPPQVIDQVAVNLAT
HTEASMATLAEPIDDVETLFNPNVVKVVSDINGLALTFSRATLPWARDDFAHQPDKLPVG
VPYRRHIGIYAYRAGFLHDFVSWGPCWLENTERLEQLRALWHGVRIHVADVLEAPPAGVD
TVEDLERVRRLLES
NT seq
765 nt
NT seq
+upstream
nt +downstream
nt
atgattccggtttttacagtcgtaattccgtcgcgctttgcctcgacccgtttgccaggc
aagccgctgcagatgattgctggtaagccgatggtccagcacgtctgggagcaggcctgt
aaaagcagcgcgcaacgtgtggtggttgccactgacgatgcgcgcattgtcgacgcctgc
aaggcgttcggcgccgaggtgctgctgacacgtaccgaccatgagtccggcaccgaccgt
ctggctgaagtcgccacgcaattggggttggccagcgacgctatcgtggtcaatgttcag
ggcgacgaacccatgatcccgccgcaagtgatcgatcaggttgctgtcaacctggctacc
cacactgaagcgagcatggcgaccctggccgagccgatcgatgatgtcgagacgcttttc
aatcccaatgtggtcaaggtcgtcagtgacatcaacgggttggcgctgaccttcagccgg
gccacgttgccgtgggcacgggatgacttcgcgcatcagccggacaaattgcccgttggc
gtaccctatcgtcgacacattggcatctacgcctatcgtgcaggcttcctgcatgacttc
gtcagctggggcccttgctggcttgagaacaccgagcgccttgagcagttacgggcactc
tggcatggcgtacgcattcacgtggcggatgtgcttgaggccccgccggccggtgttgat
accgtagaagaccttgaacgcgttcggcgtttgctggagtcatga
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