Pseudomonas psychrophila: G5J76_10410
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Entry
G5J76_10410 CDS
T06988
Symbol
fadB
Name
(GenBank) fatty acid oxidation complex subunit alpha FadB
KO
K01825
3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase / enoyl-CoA isomerase [EC:
1.1.1.35
4.2.1.17
5.1.2.3
5.3.3.8
]
Organism
ppsh
Pseudomonas psychrophila
Pathway
ppsh00071
Fatty acid degradation
ppsh00280
Valine, leucine and isoleucine degradation
ppsh00310
Lysine degradation
ppsh00362
Benzoate degradation
ppsh00380
Tryptophan metabolism
ppsh00410
beta-Alanine metabolism
ppsh00640
Propanoate metabolism
ppsh00650
Butanoate metabolism
ppsh00907
Pinene, camphor and geraniol degradation
ppsh00930
Caprolactam degradation
ppsh01100
Metabolic pathways
ppsh01110
Biosynthesis of secondary metabolites
ppsh01120
Microbial metabolism in diverse environments
ppsh01200
Carbon metabolism
ppsh01212
Fatty acid metabolism
Module
ppsh_M00087
beta-Oxidation
ppsh_M00957
Lysine degradation, bacteria, L-lysine => glutarate => succinate/acetyl-CoA
Brite
KEGG Orthology (KO) [BR:
ppsh00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00640 Propanoate metabolism
G5J76_10410 (fadB)
00650 Butanoate metabolism
G5J76_10410 (fadB)
09103 Lipid metabolism
00071 Fatty acid degradation
G5J76_10410 (fadB)
09105 Amino acid metabolism
00280 Valine, leucine and isoleucine degradation
G5J76_10410 (fadB)
00310 Lysine degradation
G5J76_10410 (fadB)
00380 Tryptophan metabolism
G5J76_10410 (fadB)
09106 Metabolism of other amino acids
00410 beta-Alanine metabolism
G5J76_10410 (fadB)
09109 Metabolism of terpenoids and polyketides
00907 Pinene, camphor and geraniol degradation
G5J76_10410 (fadB)
09111 Xenobiotics biodegradation and metabolism
00362 Benzoate degradation
G5J76_10410 (fadB)
00930 Caprolactam degradation
G5J76_10410 (fadB)
Enzymes [BR:
ppsh01000
]
1. Oxidoreductases
1.1 Acting on the CH-OH group of donors
1.1.1 With NAD+ or NADP+ as acceptor
1.1.1.35 3-hydroxyacyl-CoA dehydrogenase
G5J76_10410 (fadB)
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.17 enoyl-CoA hydratase
G5J76_10410 (fadB)
5. Isomerases
5.1 Racemases and epimerases
5.1.2 Acting on hydroxy acids and derivatives
5.1.2.3 3-hydroxybutyryl-CoA epimerase
G5J76_10410 (fadB)
5.3 Intramolecular oxidoreductases
5.3.3 Transposing C=C bonds
5.3.3.8 Delta3-Delta2-enoyl-CoA isomerase
G5J76_10410 (fadB)
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Gene cluster
GFIT
Motif
Pfam:
3HCDH_N
ECH_1
3HCDH
ECH_2
NAD_binding_2
Motif
Other DBs
NCBI-ProteinID:
QIE32630
LinkDB
All DBs
Position
2275171..2277318
Genome browser
AA seq
715 aa
AA seq
DB search
MIYEGKAITVTALESGIVELKFDLKGESVNKFNRLTLNELRQAVDAIKADASIKGVIVSS
GKDVFIVGADITEFVENFKLPDAELIAGNLEANKIFSDFEDLNVPTVAAINGIALGGGLE
MCLAADFRVMADSAKIGLPEVKLGIYPGFGGTVRLPRLIGVDNAVEWIASGKENRAEDAL
KVSAVDAVVTADKLGAAALDLIKRAISGELDYKAKRQPKLEKLKLNAIEQMMAFETAKGF
VAGQAGPNYPAPVEAIKTIQKAANFGRDKALEVEAAGFAKLAKTSASQCLIGLFLNDQEL
KKKAKIYDKIAKDVKQAAVLGAGIMGGGIAYQSASKGTPILMKDINEHGIEQGLAEAAKL
LVGRVDKGRMTPAKMAEVLNGIRPTLSYGDFGNVDLVVEAVVENPKVKQAVLAEVENHVR
EDAILASNTSTISISLLAKALKRPENFVGMHFFNPVHMMPLVEVIRGEKSSDLAVATTVA
YAKKMGKNPIVVNDCPGFLVNRVLFPYFGGFARLVSAGVDFVRIDKVMEKFGWPMGPAYL
MDVVGIDTGHHGRDVMAEGFPDRMKDDRRSAIDALYEAKRLGQKNGKGFYAYEEDKRGKQ
KKVVDSSVLEVLKPIVYEQRDVTDEDIINWMMIPLCLETVRCLEDGIVETAAEADMGLVY
GIGFPLFRGGALRYIDSIGVAEFVALADQYAELGALYHPTAKLREMAKNGQSFFG
NT seq
2148 nt
NT seq
+upstream
nt +downstream
nt
atgatttacgaaggtaaagccatcacggttacggctcttgaaagtggcatcgtcgaactg
aagttcgacctcaagggtgagtccgtcaacaaattcaaccgtctaaccctgaacgaattg
cgtcaggcagtggatgcgatcaaggcagatgcttcgatcaagggtgtcatcgtttccagt
ggtaaagacgtctttatcgtgggcgccgacatcaccgagttcgtcgaaaacttcaagttg
ccggacgccgagctgatagcaggcaacctcgaagccaacaagatcttcagtgacttcgaa
gacctcaacgttcctaccgtcgcggccatcaatggcatcgcactgggcggtggtctggag
atgtgtctggctgctgacttccgggtcatggctgacagcgccaaaattggtttgccagaa
gtcaagctgggcatctacccgggctttggcggcacggtacgtcttcctcgtctgatcggc
gttgataacgctgttgagtggattgcctccggaaaggaaaaccgcgcagaagacgcgttg
aaagtgagcgccgttgatgctgtggtgacggctgacaagctgggcgctgctgcgctggac
ctgatcaagcgcgccatcagtggcgagctggattacaaggccaagcgccaacccaagctt
gaaaagctcaagctgaacgcaatcgaacaaatgatggctttcgaaaccgccaaaggtttt
gttgccggtcaggccggtccgaactacccggccccggttgaagcgatcaagaccatccag
aaagccgcgaacttcggtcgtgacaaggcactggaggtggaagctgcaggtttcgccaag
ctggccaagacctcggcttcgcaatgcttgatcggcttgttcctgaatgatcaggagctg
aagaaaaaagccaagatctacgacaagatcgccaaagacgtgaagcaggcggccgttctg
ggcgcaggtatcatgggtggcggtattgcctatcagtcggcctccaaaggtacgccgatc
ctgatgaaagacatcaacgagcacggcatcgaacaggggcttgcagaagccgccaagttg
ctggtgggtcgcgttgataaaggtcgcatgaccccggcgaaaatggccgaagtgctgaac
ggcattcgtcctactttgtcttacggcgatttcggtaacgttgacctggtggtcgaagcg
gtagtcgaaaatccgaaggtcaaacaggctgttctggcggaagtggaaaaccacgttcgc
gaagacgccattctggcttccaacacctcgaccatttccatcagcctgttggccaaggcc
cttaagcgtccggaaaacttcgtcggcatgcacttcttcaacccggtgcacatgatgccg
ctggttgaagtgattcgtggcgaaaagtccagcgacctggctgttgcaactaccgttgct
tacgccaagaaaatgggcaaaaacccgatcgtggtcaacgactgcccgggcttcctggtc
aaccgcgtgctgttcccttacttcggcggtttcgcccgactggtcagtgccggtgtcgac
ttcgtacgtatcgacaaggtcatggaaaaattcggctggccaatgggcccggcgtacctg
atggacgtggtcggcatcgacaccggccaccatggtcgcgacgttatggctgaaggcttt
ccggatcgcatgaaagacgatcgtcgttcagcgattgacgctctgtacgaggccaagcgc
ctgggtcagaagaacggcaagggcttctacgcctacgaagaagacaagcgcggcaagcag
aagaaagtcgttgattcgagtgtgcttgaagtcctcaagcctatcgtttacgaacaacgc
gacgtgaccgatgaagacatcatcaactggatgatgatcccgttgtgtcttgaaaccgtg
cgttgcctggaagacggcattgttgaaaccgcagccgaagccgacatgggcctggtctat
ggcatcggcttcccgctgttccgtggcggcgccctgcgttacatcgattcgatcggtgtt
gcagagtttgtagcactggctgatcagtacgctgaactgggcgcgctgtaccacccgact
gcgaagctgcgtgagatggccaaaaacggccagagcttcttcggttaa
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