Pseudomonas psychrophila: G5J76_10460
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Entry
G5J76_10460 CDS
T06988
Name
(GenBank) DEAD/DEAH box helicase
Organism
ppsh
Pseudomonas psychrophila
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Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
DEAD
ResIII
SWIM
DUF5624
Motif
Other DBs
NCBI-ProteinID:
QIE32640
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Position
complement(2286340..2289042)
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AA seq
900 aa
AA seq
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MTLSQKPRLTKPLAPTWTSRFKEQSLERGRRYAKENRVRIVQIGDSMITASCQGSGENTY
RQTIHLRESAKGTLLLVDATCTCPVRTHCKHTAAVLLKIEETLNYPAAAQDAELLEKLQA
VLDSRRPNNLPELQVDDVKPVPRLWLASAEFSAFEPRNGKMQRYIQHRAALSFNYLDQYV
SGQKNTDILLRQEQQTLRIKRHPDLENLYREQLRSLGFKIATRQSKALPESAGELFELVN
DSAWLNFTLNQMQGLREQGWELQIDEGFGFDLTPVEDWYANVDEAPERDWFDLELGIIVN
GRHLSLLPILLNLMRSHSDILNPEKLARRRDDELILVNIPANPASNHGPLQVALPYGRLK
PVLATLDEFYLGEPDATSLRIKSADAPRLNALDALPLRWEGGEQIRGFAQRLRDIKDFSV
EAPEGLNANLRPYQLEGLSWMQSLRQLEVGGVLADDMGLGKTLQTLAHILCEKNAGRLDL
PAMVVMPTSLIPNWLDEAAHFTPQLKVLALFGATRKKHFAHLADYDVILTTYALLPKDIE
HLVKQPLHLLVLDEAQYIKNPGSKATQAACELIARQRLCLSGTPLENHLGELWSLFHFLL
PGWLGDVKTFNRDYRIPIERQGSNERLQHLNARIKPFLLRRTKEQVATELPPKTEIIHWV
ELNEAQRDVYETMRLAMDKKVRDEITRKGVGRSQIIILEALLKLRQVCCDLRLVSDTPPK
KGSTSGKLDSLMLMLEELFAEGRRILLFSQFTSMLSLIEIELKKRKVRYAILTGQTRDRR
TPVKDFQSGTLQIFLISLKAGGVGLNLTEADTVIHYDPWWNPAAENQATDRAYRIGQEKP
VFVYKMIARGTVEEKIQHLQQEKSDLAAGVLDGRVAGDWKLQDDDIDALFAPLPPKTEKR
NT seq
2703 nt
NT seq
+upstream
nt +downstream
nt
atgaccctgagccagaaaccccggctgaccaagccgctcgcaccgacctggaccagccgc
ttcaaagagcaaagccttgagcgtggccgccgctacgcgaaggaaaaccgcgtcaggatc
gtccagatcggcgacagcatgatcaccgccagctgccagggctcaggcgaaaacacctac
cgtcagaccatacacctgcgtgaatccgccaaaggcacattgcttttggtggacgccacc
tgcacctgtccggtacgcacccattgcaagcacaccgctgccgtcttactgaagattgaa
gaaaccttgaactaccccgccgccgctcaagatgccgagcttctggaaaagctccaggcc
gtactcgactcacgtcgccccaacaacttgccagaacttcaagtcgacgatgtaaagccg
gtgccacgcctgtggctggccagcgccgagttcagcgccttcgagccgcgcaacggcaag
atgcaacgctacatccagcaccgcgccgcactgtcgttcaactacctggaccagtacgtc
agcgggcaaaaaaacaccgacatcctgctgcgccaggaacagcagaccctgcggatcaag
cgccatccagacctggaaaacctctatcgcgagcaattgcgcagccttggcttcaaaatt
gccacccgtcagagcaaagcgctgcccgaaagcgcgggcgagttgtttgaactggtcaat
gacagtgcctggctgaatttcactcttaaccagatgcaaggcctgcgcgaacaaggctgg
gagctgcagatcgatgagggtttcggctttgacctgaccccggtcgaagactggtatgcc
aatgtcgatgaggcgcctgagcgcgactggttcgacctggagctggggattatcgtcaac
ggccggcacttgagcctgctaccgatactgctgaacctgatgcgctcccacagcgatatc
ctcaatcccgagaaactcgcccgacgccgggatgacgaactgattctggtgaatatcccg
gccaaccctgccagcaaccatggcccgctgcaggttgccctgccttacggacggcttaaa
ccggtactggctactctggacgagttctacctgggcgagccggatgccacctcgctgcga
atcaaaagcgctgatgcaccgcgcctcaacgcactcgatgccctgcccttgcgctgggaa
ggtggcgagcagattcgcggctttgcccagcgcctgcgcgacatcaaagactttagcgta
gaggcccctgaagggctcaatgccaacctgcgcccctaccagcttgaaggcctgagctgg
atgcagtcgttacgccagctcgaggtgggcggcgtactggccgacgacatgggactgggt
aaaaccctgcagacactggcgcatattttgtgcgaaaagaatgccggccgcctggatctc
ccggccatggtggtgatgcccaccagcctgatccccaactggctggacgaggctgcgcac
ttcaccccgcagctcaaggtgctggcgttgtttggcgccacccgcaaaaaacactttgca
cacctcgctgactacgacgtaatcctgaccacctatgccctgttgcccaaggacatcgag
catctggtcaaacagcccttgcacctgctggtactggacgaagcgcagtacatcaagaac
cctggcagcaaggctacccaggctgcgtgcgaactgattgcgcggcaacgcctgtgcctg
agcggcacccccctggaaaaccacctgggagaactgtggtcactgtttcacttcctgctc
cctggctggttgggcgacgttaaaacctttaaccgcgattaccgcatccccatcgagcgc
cagggcagcaacgagcgcctgcagcacctcaatgcacgcatcaagccgtttttactgcgc
cgcaccaaggaacaggtcgctaccgaactaccacccaagaccgagatcattcattgggtt
gagcttaacgaggcgcagcgcgatgtatacgaaaccatgcgccttgcgatggacaaaaaa
gtgcgcgacgaaatcacccgtaaaggtgtcgggcgcagccagattattatccttgaggcg
ctgctaaaactgcgtcaggtgtgctgcgacctgcgcctggtcagcgacaccccgccgaaa
aagggcagtacttccggcaagctcgacagcttgatgctgatgctcgaagaactgtttgcc
gaaggtcgacgcatcttgctgttttcacagttcacctcgatgctcagcctgatcgaaatc
gaactgaaaaaacgcaaggttcgttacgccatcctgacggggcaaacccgtgaccggcgc
accccggtcaaagacttccagagcggcacgctgcagatatttctcatcagcctcaaggcg
ggtggtgtcggcttgaacctcaccgaggccgacacagtgattcactacgacccgtggtgg
aacccggcggctgaaaaccaggccactgaccgcgcctaccgcattggccaggaaaaaccg
gtgtttgtgtacaagatgattgcccgcggcaccgtggaagagaaaatccagcacttgcag
caggaaaagtcggatttggcagcaggcgttcttgacggacgagtcgctggcgactggaag
cttcaggacgacgacatcgatgcgctgtttgcgccgctgccgcccaaaacagagaagcgc
tga
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