Pseudomonas psychrophila: G5J76_11535
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Entry
G5J76_11535 CDS
T06988
Symbol
gyrA
Name
(GenBank) DNA gyrase subunit A
KO
K02469
DNA gyrase subunit A [EC:
5.6.2.2
]
Organism
ppsh
Pseudomonas psychrophila
Brite
KEGG Orthology (KO) [BR:
ppsh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
ppsh03032
]
G5J76_11535 (gyrA)
03400 DNA repair and recombination proteins [BR:
ppsh03400
]
G5J76_11535 (gyrA)
Enzymes [BR:
ppsh01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
G5J76_11535 (gyrA)
DNA replication proteins [BR:
ppsh03032
]
Prokaryotic type
DNA Topoisomerases
G5J76_11535 (gyrA)
DNA repair and recombination proteins [BR:
ppsh03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
G5J76_11535 (gyrA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_topoisoIV
DNA_gyraseA_C
Motif
Other DBs
NCBI-ProteinID:
QIE32851
LinkDB
All DBs
Position
2534527..2537190
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AA seq
887 aa
AA seq
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MGELAKEILPVNIEDELKQSYLDYAMSVIVGRALPDARDGLKPVHRRVLFAMSELNNDWN
KPYKKSARVVGDVIGKYHPHGDTAVYDTIVRMAQPFSLRYLLVDGQGNFGSVDGDNAAAM
RYTEVRMTKLAHELLADLHKETVDWVPNYDGTEMIPAVMPTRIPNLLVNGSSGIAVGMAT
NIPPHNLGEVIDGCLALIDNPELSIDELMQFIPGPDFPTAAIINGRAGIIEAYRTGRGRI
YMRARSMIEDIDKVGGRQQIVITELPYQLNKARLIEKIAELVKEKKLEGITELRDESDKD
GMRVVIELRRGEVPEVILNNLYAQTQLQSVFGINIVALIDGRPRILNLKDLLEAFVRHRR
EVVTRRTVFELRKARERGHILEGQAVALSNIDPVIALIKASPTPSEAKEALISTPWESSA
VVAMVERAGADSCRPDNLDPQYGLREGKYFLSPEQAQAILELRLHRLTGLEHEKLLAEYQ
EILNQIGELIRILNSAERLMEVIREELEVIRAEYGDVRRTEILDHRLDLTLGDMIPEEER
VVTISHGGYAKTQPLAAYQAQRRGGKGKSATGVKDEDYIAHLLVANSHTTLLLFSSKGKV
YWLKTYEIPEASRAARGRPLVNLLPLGEGEYITTMLPVEEYTEGHFIFMATANGTVKKTP
LESFSRQRSVGLIALELDEGDVLISAAITDGEREVMLFSDGGKVTRFKESDVRAMGRTAR
GVRGMRLPEGQKLISMLIPEEGSQILTASARGYGKRTAISEFPEYKRGGQGVIAMVSNDR
NGRLVGAVQVQDGEEIMLISDQGTLVRTRVDEVSSLGRNTQGVTLIKLASDETLVGLERV
QEPSEVEGEELEGEGEGGAEFDGEAIIDGVDDEQPLEAGADEEEPQQ
NT seq
2664 nt
NT seq
+upstream
nt +downstream
nt
atgggcgaactggccaaagaaatcctcccggtcaatatcgaagacgagctgaaacagtcc
tacctcgactacgcgatgagcgtaattgtcgggcgagcactgcctgatgcacgcgatggc
ttgaagcccgtgcaccggcgtgtgctgtttgcgatgagcgaactgaacaacgactggaac
aagccgtacaagaaatctgcccgtgtggtcggtgacgtaatcggtaagtatcacccgcac
ggtgataccgctgtttatgacaccatcgttcgaatggctcagccattctccctgcgctac
ctgttggtagacggtcagggcaacttcggttcggtcgacggcgataatgcggctgcgatg
cgatataccgaagtgcgcatgaccaagttggcccacgaactactggccgacttgcacaag
gaaaccgtggattgggtgccgaactacgacggcacggaaatgatcccggccgtcatgccg
acgcgaattcccaatttgttggtcaacggttccagcggtatcgctgtgggcatggccacc
aacattcccccgcacaacctgggtgaagtcatcgacggttgcctggcgctgatcgataac
ccggagttgagcattgatgagctgatgcagttcattccgggcccggacttcccaaccgct
gcgatcattaacggtcgcgccggcatcatcgaagcctatcgcaccggtcgtggccgtatt
tacatgcgcgcccgctcgatgatcgaagacatcgacaaggtcggtggtcgtcagcagata
gtgatcactgaacttccttaccagttgaacaaggcgcgtttgatcgaaaagatcgccgag
ctggttaaagagaagaagctcgaaggtatcaccgagctgcgcgacgagtctgataaagac
ggtatgcgtgtcgtgatcgaactgcgccgcggtgaagtgcctgaggttatccttaataac
ctctacgcccagacccagttgcaaagtgttttcggtatcaacatcgttgcgctgatcgac
ggccgtccacgcatccttaacctcaaggatctgctggaagcgttcgttcgtcaccgccgt
gaagtagttacccgccgtactgttttcgaactgcgcaaagcccgtgaacgtggtcatatt
cttgagggacaggcggttgccctgtccaacatcgacccggtcatcgcgctgatcaaggcc
tcgccaaccccgtctgaagccaaggaagctctcatcagcacgccttgggagtcgagtgcg
gtagtagccatggttgagcgtgccggtgccgattcgtgccgccccgacaaccttgatccg
caatatggcctgcgcgaaggcaagtacttcctgtcgccagagcaggctcaggcgattctt
gaattgcgcctgcaccgtttgaccggccttgagcacgagaagctactggccgagtaccag
gaaatcctcaaccagatcggtgagctgatccgcatcctgaacagcgccgagcgcttgatg
gaagtgatccgtgaggaactggaagtcattcgtgctgaatacggcgatgtgcgccgtact
gaaatcctggatcaccgtcttgacctgacactgggtgacatgattccggaagaagagcgt
gttgtaaccatttcccatggtggctatgccaagacccagccgttggctgcgtatcaggcc
cagcgtcgtggcggtaaaggtaaatcggctactggcgtcaaggatgaggattacatcgct
catctgctggtcgccaacagtcacaccacgctgctgctgttctccagcaaaggcaaggtg
tactggctcaagacgtatgaaatccctgaagcgtcccgcgcggcccgtggtcgtccgctg
gtcaacctgttgccgctgggtgagggtgagtacatcaccaccatgctgccggttgaggaa
tacaccgaaggtcacttcatctttatggcaaccgctaacggtaccgtgaagaagaccccg
ctggaatccttcagccgtcagcgcagcgttggcttgatcgcgctggaactggacgaaggc
gacgtgctgatcagcgctgcgatcaccgatggtgagcgcgaagtcatgctgttctccgac
ggtggcaaggtgacacgtttcaaagagtccgatgtacgtgccatgggccgtactgctcgc
ggcgtgcgcggcatgcgtctgccagaaggtcagaagctgatttcgatgctgatccctgaa
gaaggtagccagatcctcaccgcttcggcgcgtggttatggcaagcgcacggcgatcagt
gagttccctgaatacaagcgtggcggtcaaggcgttatcgccatggtcagcaacgatcgt
aacggccgtctggtcggtgcggttcaggtgcaggacggcgaagagatcatgctcatctcc
gatcagggcactctggtgcgtacccgtgtcgacgaagtgtcgagcctgggtcgtaacact
cagggcgtcaccttgatcaagcttgccagtgatgaaacgctggtagggcttgagcgggtt
caggaaccttcggaagttgaaggtgaagagcttgaaggtgagggtgaaggcggtgcagag
ttcgacggtgaggccatcatcgatggcgttgacgacgagcagccgctagaggctggcgct
gacgaagaagagccgcagcaataa
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