Pseudomonas psychrophila: G5J76_12105
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Entry
G5J76_12105 CDS
T06988
Symbol
nhaR
Name
(GenBank) transcriptional activator NhaR
KO
K03717
LysR family transcriptional regulator, transcriptional activator of nhaA
Organism
ppsh
Pseudomonas psychrophila
Brite
KEGG Orthology (KO) [BR:
ppsh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ppsh03000
]
G5J76_12105 (nhaR)
Transcription factors [BR:
ppsh03000
]
Prokaryotic type
Helix-turn-helix
LysR family
G5J76_12105 (nhaR)
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Gene cluster
GFIT
Motif
Pfam:
HTH_1
LysR_substrate
TMEM135_C_rich
Motif
Other DBs
NCBI-ProteinID:
QIE32955
LinkDB
All DBs
Position
complement(2654671..2655570)
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AA seq
299 aa
AA seq
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MLNYRQLHYFWVVAKTGSIVRACEQLNLTPQTISGQISLLEDTYGLPLFQKVGRQLELTE
TGRQVLPYAEQIFQVGIELESMLRMAPKEQQILFRVGVADVVPKSIVYRLIAPTMELDEP
IRITCREDKLDRLLADLAIQRLDLVISDSPMPSHLDIKGFSQKLGECGISFFATPALAKH
YSENFPQCLQGAPLLIPGPETVLRSRLLRWLAEQQIQPRIVGEFDDSALMQAFGQSGIGV
FIAPSVIAQEVIRQFDVELIGHTEAVTESFYAITVERKIRHPGIVAITEGARRELFTPR
NT seq
900 nt
NT seq
+upstream
nt +downstream
nt
atgcttaattaccgtcaactccattatttctgggtcgtggccaaaaccggcagcatcgtt
cgcgcctgcgagcaactgaacctcaccccgcaaaccatcagcgggcaaatcagcctgctg
gaagacacctacggcctgcccttgtttcaaaaggtcgggcgccaacttgagctcacagag
accgggcgccaggtgttgccctatgccgagcagatctttcaagtcggtatcgagctggaa
agcatgctgcgcatggcgcccaaggagcagcagattctgtttcgggtaggcgtggccgat
gtggtgcccaagtcgatcgtgtatcgcttgatcgctccgaccatggaactggatgagccg
atccgtatcacctgtcgtgaagacaagctggaccggctcctggcagacctggccattcaa
cgtctggatctggtgatttccgacagcccgatgccctcccacctcgacatcaagggcttc
agtcaaaaactgggcgagtgcggcatcagttttttcgccacccctgccctggccaagcat
tactcagaaaactttccgcagtgcctgcaaggcgcgccactcctgattcctgggcccgaa
accgtgttgcgtagccgcttgctgcgctggctggccgagcagcagatacagccgcggatc
gtcggtgagttcgatgacagtgcactgatgcaggcttttggccaatccgggatcggcgta
ttcattgcccccagcgtgattgcccaggaagtgatacgccagtttgacgttgagttgatc
ggccataccgaggctgtgaccgaatcgttttacgccattaccgtcgagcgaaaaatccgc
caccccggcatcgttgccatcaccgagggggcccgacgcgaattgtttaccccgcgctga
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