Pseudomonas psychrophila: G5J76_12230
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Entry
G5J76_12230 CDS
T06988
Name
(GenBank) tetratricopeptide repeat protein
KO
K20543
cellulose synthase operon protein C
Organism
ppsh
Pseudomonas psychrophila
Brite
KEGG Orthology (KO) [BR:
ppsh00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
ppsh02000
]
G5J76_12230
Transporters [BR:
ppsh02000
]
Other transporters
Pores ion channels [TC:
1
]
G5J76_12230
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BCSC_C
TPR_19
TPR_14
TPR_16
TPR_17
TPR_2
TPR_12
ANAPC3
TPR_11
TPR_CcmH_CycH
TPR_8
TPR_1
TPR_7
ARM_TT21_N
TPR_9
TPR_6
ARM_TT21_C
ARM_TT21_5th
TPR_20
TPR_10
TPR_15
ARM_TT21
TPR_21
Clathrin
TPR_4
TPR-S
TPR_Slam
TPR_5
Motif
Other DBs
NCBI-ProteinID:
QIE32975
LinkDB
All DBs
Position
2683572..2687504
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AA seq
1310 aa
AA seq
DB search
MRPHRHSLAIGFLTAVISTAVHADTRDVQSQLVEQGQYWQGRDNSQRAAEAWEKVLRLDP
NQVDALYGMGLASIKQKKSAQARQYLARLQALSPRPWLAAQLEQDLALTEPQNIALLAEA
RRLVDSDQRDQATQVFRKLFAGRTPSGTLGREYYNNLAFNPAGWPEARKGMERLLHETPN
DSILALFLAKQLVRHEDTRPEGIRTLAKLSTRPDIGGDADESWRLALVWSGPPNPAQIPL
FDAFLKAHPDDQEIRDLLNKGKSKASTAGRVASWQPDPLVERGLQALEKGDQAGAEQAFA
ARLKNKANDPDALGGLGVVRQQQNRLAEAEQLLNRAIGNGGTRWKPALDNVRYWALLQQA
RNQAKAQPDKARQNIAQAMRLNPKGVEARLALADLQAQSGQLDEAQASYRQILSVQRDNA
QAVQGLVSVLSQSGQADEALRLLDTLTAAQQAELGGGGRLHALRSTQAAALAEQRGDTRG
AQQALVQAVKDDPDNVWTRFDLSRLYLKTGEPQKARDLIDSYLKTHPADVDALYTSALLS
VEMEQWDAAQAAISRIPAGRRTADMTELADQITLTVQVKLAATMAKRGQRQEALALLDRL
QPMASRSPDRMATLATAYVDTGDSTRALTMMRDVINQTPTPSADLMLQYANLLLKTGNDA
QVNSILRGLQNQPMSLATRKRFDDLLYQYRIRQADLLREGGDLAGAYDTLAPALASRPGD
AGAVSALARMYVSSGDNAKAFELYKPLLQRQPNDPQILLNSADAAVLARDNGYAERALEQ
FVKLQNYDPQSLTEAARIYRSMGKTSQAAHLLRKAVDIEQTEKKRSLATQSAGTGAAPNP
FAGLSGPGNQVGRGAIDGIPAPAQAVLDSASYSAGSNSLLPQDVYPGQQQARVAAAIPSR
AAVPSGRFGNAGANPFAPQGTVNVAVDQASSAQRALDSILQERSAYVTQGVTVRTNDSEP
GLGKMTDIETPLEINFPAGDNRLAVRVTPVSLNAGRVGVYAAERFGSGKASTEGIGAQRE
SGVGVSVGYARPDEGIKADIGTTPIGFQYSTVAGGVSVDRPLASNSNVRYGVNVSRRAVI
DSVTSFAGTTDERTGQSWGGVTANGGRGQLSYDDQAIGAYGYGAWHKLLGHNVESNSRAE
LGAGVYWYLQNDEDSKLTLGLSATGMSFDNNQNFFTYGHGGYFSPQSYFALGVPVAWSQR
TERLSYQVKGSVGVQYSHQAGADYFPGDKDLQAVNDQRYSSESKAGVGYSLSAAGEYKFG
SSFFLGANLGLDNAQDYQQITGAMYLRYMFEDMNGPMALPVSPYSSPYSN
NT seq
3933 nt
NT seq
+upstream
nt +downstream
nt
atgcgtccgcaccgccactcgctagccatagggtttttaaccgccgtgatcagcactgcc
gtccacgccgacacaagggacgtgcaatcgcagttggtcgagcagggccagtactggcag
ggtcgtgacaattcacaacgagcggccgaagcctgggaaaaagtgctgcgcctggaccct
aatcaagtcgacgccctttatgggatgggccttgcaagcatcaagcagaaaaagtccgcg
caagccaggcaatacctggcgcgcttgcaagctttgtcgccccgaccatggttggctgcg
cagctggaacaggatctagcccttacagaaccgcagaacatcgcgctgctcgccgaggct
cgccgtctggtcgatagcgaccagcgtgaccaggcgactcaggtatttcgcaaactcttt
gccgggcgcacaccgtcaggcactttaggccgagagtattacaacaaccttgcattcaat
cctgcaggctggccggaagctcgcaaaggcatggagcgtttgctccacgaaacgccgaat
gactcgattctggcgctgtttcttgccaagcaattggttcgtcacgaagacactcgcccc
gaaggtattcgtacactggccaaactgtcgacgcggcccgacatcggtggtgacgctgac
gagagttggcgtctggcgctggtgtggtccggtcccccgaatcccgcccaaatacctttg
ttcgacgcatttttgaaggctcatccggatgaccaggaaatacgcgatctactgaacaaa
ggtaaatcgaaagccagcactgctggccgggtagcaagctggcaaccagatccactggta
gagcgtggattgcaagcccttgaaaaaggcgaccaggcaggtgccgagcaagctttcgcc
gcacgcctgaaaaacaaggccaatgaccctgatgctctgggtggacttggtgtggtgcgc
caacaacagaatcgtctggccgaagctgagcagttactgaaccgtgccatcggcaacggt
ggaacgcgctggaagcctgcgttggacaatgtgcgttactgggccttgctgcaacaggcg
cgcaaccaggccaaggctcaacccgacaaggcccggcagaatattgcacaggccatgcgt
cttaaccctaaaggcgtcgaagcgcgcctggccctggcagatctccaggcccagagcggt
caactggatgaagcccaggccagttatcgccaaatattgagtgtgcagcgagataatgcg
caggccgtacaggggctggtgagtgtactgtcgcaatcggggcaggccgatgaagcattg
cgtctgctcgataccttgacagcagcccagcaggccgaattgggcggtggtggtcgactg
catgcgctgcgctccacccaggctgctgcattggccgagcagcggggcgatacccgcggt
gcccaacaggcgttggtgcaagcggtcaaggacgacccggataacgtttggacccgcttt
gatctctcccgtctgtacctcaagaccggcgagccgcaaaaggctcgagacctgatcgac
agctaccttaaaacgcatccggcggacgttgacgcgctctataccagcgcattgctctcg
gtggaaatggaacagtgggacgccgcacaggctgccatcagccgcattcctgcggggcgt
cgcaccgctgacatgaccgagctggccgaccagatcaccctgactgtacaagtcaaactc
gccgcgaccatggccaagcgtggccagcgtcaagaagctctcgctctgcttgatcgtttg
caaccaatggccagccgcagtccggatcgcatggcgacgctggcgacggcctatgtcgac
accggtgattccacacgtgcattgaccatgatgcgcgacgtgattaaccagacaccgaca
ccgtccgccgacctgatgttgcagtacgccaatttgttgttgaagacgggcaatgatgct
caggtcaattcgattctgcgcggtctgcaaaaccagccaatgagcctcgcgacacgcaag
cgcttcgatgatttgctttaccaataccgtatacggcaagccgatctgctgcgtgagggc
ggtgacctggcaggggcttatgacactcttgcgccggcactggcatcacggcccggggat
gcgggtgcggtttcagcacttgcgcggatgtatgtcagcagcggtgacaatgccaaggca
ttcgaactgtataaacccttgctgcagcgtcagcccaacgacccgcaaattctgcttaat
tcagcggatgcagcagttttggcccgcgacaacggctacgccgaacgtgcgctggagcag
tttgtgaagctgcaaaactacgacccgcagtccttgaccgaagcggcgcggatctaccga
agcatgggcaagaccagtcaggccgcccatttgttgcgcaaggccgtggacattgagcag
accgagaaaaaacgcagtctggcgactcagtctgccggtacgggcgctgcgccgaaccct
tttgcaggtttgtcggggccgggtaatcaggttggccgcggggcgatcgacgggattcct
gctccggcgcaagccgtgctggattcggcatcgtatagcgcaggcagcaattcgttattg
ccccaagacgtctatccaggtcagcaacaagcgcgcgtggcagccgcaatcccgagccgt
gcggccgtgccctccgggcgatttggcaatgccggggccaatcctttcgcgccccaaggc
acggtcaatgtagcggtagatcaggccagttctgcccagcgggcactggacagcatcctt
caggaacgcagtgcttacgtgactcagggtgtgaccgtgcgcaccaatgacagcgagccg
ggcctgggcaaaatgaccgatatcgagacgccgctggagattaattttccggcaggtgac
aaccgtctcgctgtacgtgtgacgccggtatctctgaacgcgggacgggtgggtgtgtat
gccgctgaacgcttcggcagtggcaaggcgtcaactgaggggattggtgcccagcgggaa
agtggtgtgggtgtgagtgtgggctacgcccgcccggacgagggtatcaaggccgacatt
ggcaccacgcctattggcttccagtacagcactgttgccggtggcgtgagtgtcgatcgc
ccgctcgccagcaactccaatgttcgctatggcgtcaacgtctcacgccgcgcggtgatc
gacagcgtgacgtcgttcgccggtacaacggatgagcgtaccgggcagtcgtggggcggt
gtgacggccaacggcggtcgtggccagctgagctacgacgaccaggctatcggtgcttat
ggctacggcgcctggcacaagctgttaggccataacgtcgagtccaacagccgtgccgaa
ctgggcgccggtgtttactggtatctgcaaaatgacgaagacagcaagctgaccctcggc
ctgagcgccactggcatgagcttcgacaataaccagaacttctttacctacggtcatggt
ggttatttcagtccacaaagttactttgccctcggcgtgccggtggcgtggtcgcagcgt
accgaacgcctcagctatcaggtcaagggttcggtgggtgtccagtactcccatcaggcc
ggtgcggactacttccccggcgacaaggatttgcaggctgtcaacgatcagcgctactcc
agcgagagcaaagcaggcgttggttacagcctctctgcagcgggtgagtacaagtttggc
tcgagctttttcctgggggccaatctcggcttggacaacgcccaggattaccagcaaatc
acgggtgccatgtacttgcgttacatgtttgaagacatgaacggcccgatggcactgccg
gtcagcccctacagttcaccttattccaattga
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