Pseudomonas psychrophila: G5J76_12465
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Entry
G5J76_12465 CDS
T06988
Symbol
glgX
Name
(GenBank) glycogen debranching protein GlgX
KO
K01214
isoamylase [EC:
3.2.1.68
]
Organism
ppsh
Pseudomonas psychrophila
Pathway
ppsh00500
Starch and sucrose metabolism
ppsh01100
Metabolic pathways
ppsh01110
Biosynthesis of secondary metabolites
Brite
KEGG Orthology (KO) [BR:
ppsh00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00500 Starch and sucrose metabolism
G5J76_12465 (glgX)
Enzymes [BR:
ppsh01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.68 isoamylase
G5J76_12465 (glgX)
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Gene cluster
GFIT
Motif
Pfam:
CBM_48
Alpha-amylase
Isoamylase_C
Glyco_hydro_31_2nd
GHL5
Motif
Other DBs
NCBI-ProteinID:
QIE33019
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Position
complement(2737876..2740029)
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AA seq
717 aa
AA seq
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MSKHTSAPPTGDTLRIREGLPFPLGATWDGLGVNFALFSANATKVELCLFDANGEVELER
IELPEYTDETFHGYLPDAHPGQVYGYRVYGPYEPENGHRFNHHKLLIDPYAKQLVGELKW
SEALFGYTIGHPDADLSFDERDSAPFVPKCKVIDPAHTWGHDHRLSVPWDRTLFYEAHVR
GISMRHPAVPDAVRGTFAGLMVDEVVEHITGLGVTSVELLPVHAFVNDQHLLQKGMTNYW
GYNSIAFFAPDPRYLASGKIAEFKEMVARLHKAGLEVILDVVYNHTAEGNEQGPTLSMRG
IDNASYYRLMPEDKRYYINDSGTGNTLDLSHPCVLQMVTDSLRYWAREMHVDGFRFDLAT
ILGRYHDGFNERHSFLVACRQDPLLRRVKMIAEPWDCGPGGYQVGGFPPGWAEWNDRFRD
TVRAFWKGDEGQLADFAGRMTGSADLFNHRGRRPYSSVNFITAHDGFTLHDLVSYNDKHN
EANEENNQDGSNNNISWNHGVEGPTDDPEINALRQRQMRNFMATLLLAQGTPMLVAGDEF
ARTQHGNNNAYCQDSEIGWINWELDKTGKSLLAFVKRLIKLRLQYPILRRGLFLVGHSSD
TPGVKDVTWLAPDGTEMTTEQWQDGQARCLGMLLDGRAQVSGVQRAGADASLLIVVNANH
DPISFNLPKVPHGISWSCKLDTTDPTIKGPQHLPFNKPYEVTGRSLVLFELQHTEVS
NT seq
2154 nt
NT seq
+upstream
nt +downstream
nt
atgagtaaacacacgtcagcaccgcccactggcgacactttgcgcatccgcgaaggactg
cccttccccctgggcgccacctgggatggactgggcgtcaacttcgccctgttttcagcc
aacgccaccaaagttgaactgtgcctgttcgacgctaacggtgaagttgagctggagcgt
atcgagctgcccgaatacaccgacgagacctttcacggctacctgccagacgcccacccc
gggcaagtttatggctaccgcgtgtatggtccctacgaaccggaaaacggccatcgcttc
aaccaccataaattgctgattgacccttacgccaagcagcttgtgggagaactcaaatgg
tcagaagccctgtttggctacaccatcggccatccggatgccgatctgagttttgatgag
cgtgacagcgcgccatttgtgcccaagtgcaaggtgatcgacccggcgcacacctggggc
cacgaccaccgactcagcgtgccctgggaccgcaccctcttctacgaggcccacgtacgc
ggcatcagcatgcgccaccccgccgtaccagatgcggtacggggcacctttgccgggttg
atggtcgatgaagtggtcgaacacatcaccggcctgggcgtcaccagcgtcgagttgttg
ccggtacacgcattcgtcaacgaccagcacctgctgcaaaaaggcatgaccaattattgg
ggttacaacagcatcgcctttttcgccccggacccgcgttatctggccagcggcaagatc
gccgagttcaaggaaatggtcgcgcgcctgcacaaggccgggctggaggtaattctggat
gtggtctacaaccacaccgccgaaggcaacgagcaaggcccgaccctgtccatgcgcggc
atcgacaacgcctcgtactaccggttgatgcccgaggataaacgttattacatcaatgat
tcgggcaccggcaacaccctggacctgagccacccgtgcgtcttgcagatggtcaccgac
tcgctgcgctactgggcccgggaaatgcacgttgacggcttccgcttcgacctggcaacc
attctggggcgttatcacgacggctttaacgaacgtcacagttttttggtggcctgccgc
caggacccgctgttgcgccgggtcaaaatgattgctgaaccctgggactgcgggcccggg
ggctatcaggtcgggggtttcccgcctggctgggcggagtggaacgaccgctttcgcgac
accgtgcgcgccttctggaaaggcgacgaaggccagttggccgactttgccggacgcatg
accggctctgccgacctgttcaatcatcgtggtcgcaggccctacagctcggtcaatttc
attaccgcccatgacggcttcaccttgcacgatctggtgtcgtacaacgacaagcacaac
gaagccaacgaagagaacaatcaggacggcagcaacaacaacatttcgtggaaccacggg
gtggaaggccccaccgacgatcccgaaatcaatgcgctgcgtcagcgccagatgcgcaac
ttcatggccaccctgctcctggcccaaggcacgccgatgctggtagccggcgacgagttc
gcccgcacccaacacggcaacaacaacgcctactgccaggacagcgaaatcggctggatc
aactgggaactggacaagaccggtaaatcgctgctggcgtttgtcaaacgcctgatcaag
ttacgcctgcaataccccatcttgcggcgcggcctgtttttggtgggtcactccagcgat
accccgggggtaaaagacgtcacctggttggcacccgatggcaccgagatgacgaccgag
cagtggcaggacggtcaggcccggtgcctgggcatgctgctggatggccgggcccaggtg
tccggagtacaacgggccggagcagacgcttcattgctgatcgtcgtgaatgcgaaccac
gacccgatcagcttcaacttgcccaaagtcccccacggcatcagttggtcatgcaagctc
gacaccacggacccgaccatcaaaggcccccagcacctgccgttcaacaagccctacgag
gtcaccggacgctcgctggtgctgtttgaactgcaacataccgaggtgtcgtaa
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