Pseudomonas psychrophila: G5J76_14475
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Entry
G5J76_14475 CDS
T06988
Name
(GenBank) ATP-dependent DNA helicase
KO
K10844
DNA excision repair protein ERCC-2 [EC:
5.6.2.3
]
Organism
ppsh
Pseudomonas psychrophila
Pathway
ppsh03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
ppsh00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
G5J76_14475
09124 Replication and repair
03420 Nucleotide excision repair
G5J76_14475
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ppsh03021
]
G5J76_14475
03036 Chromosome and associated proteins [BR:
ppsh03036
]
G5J76_14475
03400 DNA repair and recombination proteins [BR:
ppsh03400
]
G5J76_14475
Enzymes [BR:
ppsh01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.3 DNA 5'-3' helicase
G5J76_14475
Transcription machinery [BR:
ppsh03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
G5J76_14475
Chromosome and associated proteins [BR:
ppsh03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
G5J76_14475
DNA repair and recombination proteins [BR:
ppsh03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
G5J76_14475
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Helicase_C_2
DEAD_2
DEAD
HBB
ResIII
Helicase_C
Motif
Other DBs
NCBI-ProteinID:
QIE33384
LinkDB
All DBs
Position
3235072..3237324
Genome browser
AA seq
750 aa
AA seq
DB search
MSYRVAVRALCEFTAKVGDLDLRFTPSPTAQQGIAGHRTVASRRSALYQPELSLEGQYGA
LTVRGRADGYDPVANVLEEVKTYRGDFAAMAANHRQLHWAQARVYGWLLCQSLQLPQVNL
ALVYFDIVSEKETRLQETWSAADLQQFFEQQCGLFLAWAEQEMSHRQARDEAARRLAFPH
EQFRTGQRALAEAVYKTASTGRCLMAQAPTGIGKTIGTLFPLLKAMPARQLDKVVFLTAK
TPGRKLALDAAQVLYPKGQNVPLRVLELVARDKACEYPENACNGDSCPLARGFYDRLPDA
RLAAVAQAPLDQQTLRSVALAHGICPYYLSQEMARWADVVVADYNYYFDFSALLYGLAQA
NQWRVATLVDEAHNLVERARQMYSASLDQQAFNSVRHTAPAALDKPFKRLNREWNALHKE
QAGAYQVYPTLPEKWLTALSACITAIGDYLNDHPQGLTGNLQSFYFETLQFNRVAELFDP
HFLFDVSLREDGKRRLSQLNLRNIVPAGFIGPRLGSAQSNVLFSATLSPQTYYANLLGLP
ADTVWMDVESPFKAEQLTVNVVSRISTRFAHRQASLEPIVELIARQFEQRPGNYLAFFSS
FDYLQQVAQLLAERYPHVSQWSQARRMDEAARQGFLDQFTLSSQGVGFAVLGGAFGEGID
LPGARLIGAFVATLGLAQFNPVNEQIKQRMAALFGAGYDYTYLYPGVQKVVQAAGRVIRT
QSDQGTLYLIDDRFAEPKVQQLLPRWWQLG
NT seq
2253 nt
NT seq
+upstream
nt +downstream
nt
gtgagttatcgcgttgcggtgcgtgccttgtgcgagttcacggccaaggtcggcgatctg
gatctgcgctttacgccgtcacccacggcgcagcagggcattgccggtcatcgcacggtg
gcctcgcggcgcagtgcgctgtaccagccagagttgagtcttgaaggccagtacggggcg
ttgaccgtgcgcggccgggcagacggctatgacccggtggccaatgtgctggaagaggtg
aaaacctatcgtggcgatttcgccgcaatggcggccaaccaccgccagttgcattgggca
caagcccgcgtctacggctggctgctgtgccaaagtctgcaattgccgcaggtcaatctg
gcgctggtgtacttcgacattgtcagcgaaaaggaaacacgtcttcaggaaacctggtcg
gctgcggatttgcagcagtttttcgagcagcaatgcgggttgttcctggcctgggccgag
caggaaatgagccatcgccaggctcgggacgaagccgctcgcaggctggcctttccccat
gagcagtttcgtaccgggcaacgggcattggccgaggcggtgtacaaaaccgccagtacc
gggcgctgcctgatggctcaggcgccgaccgggatcggcaaaaccattggcaccctgttt
ccgctgctcaaggccatgcctgcgcggcaactcgacaaagtagtgtttctgaccgccaag
actccgggccgcaagctggccctggatgcggcgcaggtgctctatcccaaggggcagaat
gtgccgttgcgggtgctggagttggttgcgcgggacaaggcctgtgaataccccgagaac
gcgtgcaatggcgattcatgcccattggccagaggtttttatgatcgtttgcctgatgcg
cgtctggcggcggtcgcccaggcccccctcgatcagcagaccttgcgcagcgttgcgctg
gctcacgggatttgcccgtattacctgagtcaggaaatggcccgctgggctgatgtggtg
gttgcggactacaactattacttcgacttcagtgcattgctctatggcctggcccaggca
aaccagtggcgggtcgcgacgctggtggacgaagcccacaatctggttgagcgtgcgcgg
cagatgtacagcgccagtctggaccagcaggctttcaatagcgtgcgtcacacggcaccg
gccgcgctcgataagcctttcaaacgtctgaaccgtgaatggaatgcgctgcacaaggag
caggcgggggcctatcaggtttaccccacgctgccggagaagtggctcacggccttgtcg
gcttgcatcaccgccatcggcgactacttgaatgatcacccgcaagggctgaccggtaat
ctgcaaagcttctactttgaaactctgcagttcaatcgagtggccgaactgtttgatccg
cactttttgttcgacgtcagtctgcgtgaagacggcaagcggcgtctgtcgcagctcaac
ctgcgcaacatcgtacctgcaggttttatcggcccgcgcctggggagtgcccagagtaat
gtgctgttttcggccaccctgagcccgcagacctattacgccaacttgctggggttaccg
gctgacacggtctggatggacgtcgagtcaccgttcaaggctgagcaactcaccgtaaac
gtggtcagccggatatcgacccggtttgcccatcgtcaggcttcgctggagccgattgtc
gaactgatcgcccgtcagtttgagcaacggccgggtaactacctggcgtttttcagcagc
tttgattatctgcaacaggttgcccaattgctcgccgagcgctatccccacgtcagccaa
tggtcccaggcgcggcgtatggatgaagcggcacgccagggatttctcgatcagttcacc
ctgtcgagccagggcgtgggttttgcagtgctgggcggagcctttggcgagggtatcgat
ttgccaggcgcccggctgataggcgcgtttgtcgcgaccttggggctggcgcagttcaac
ccggtcaatgaacagatcaaacagcggatggcggcattgtttggcgccggttatgactac
acctacctgtaccccggtgtgcaaaaagtggtgcaggccgctggacgggtgatccgtacc
caaagtgatcagggcacgctgtatctgattgatgaccgttttgccgagcccaaggtgcag
caactcttgcctcgctggtggcaattgggttga
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integrated database retrieval system
