Pseudomonas psychrophila: G5J76_14995
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Entry
G5J76_14995 CDS
T06988
Name
(GenBank) cryptochrome/photolyase family protein
KO
K06876
(6-4)DNA photolyase [EC:
4.1.99.13
]
Organism
ppsh
Pseudomonas psychrophila
Brite
KEGG Orthology (KO) [BR:
ppsh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ppsh03400
]
G5J76_14995
Enzymes [BR:
ppsh01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.13 (6-4)DNA photolyase
G5J76_14995
DNA repair and recombination proteins [BR:
ppsh03400
]
Prokaryotic type
SSBR (single strand breaks repair)
Direct repair
G5J76_14995
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DPRP
Motif
Other DBs
NCBI-ProteinID:
QIE33484
LinkDB
All DBs
Position
complement(3348237..3349775)
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AA seq
512 aa
AA seq
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MNATRRLCLILGDQLSFDHASLQGLDTENDIVLLVEVMEEASHVPHHPQKIVLVFSAMRH
FAEALQQRGIRVQYVKLDDPNNSGSVPNELRRWEALLQPDEIHMTECGDWRLEHSLRACG
AGIQWHGDARFLCSRPEFSAWANAKKQLRMEYFYREMRRKSGLLLNGDGSPVGGAWNFDA
ENRKALPKGIKPPSPARFSPDAITRDVLELVAKNFSTHYGTLDTFDYPVTHAQAQALWSY
FLDWGLAAFGDYQDAMASDEPFLFHARISAALNIGLLDVRQLCSDVESAYWSGSIALNAA
EGFIRQLIGWREYVRGVYWLKMPDYADGNVFGNTRSLPEFYWTGDTKMNCMSQAIGQSLE
HAYAHHIQRLMVTGNFALLAGILPSQICEWYLAIYMDAFDWVELPNTLGMVMHADGGYLG
SKPYCASGQYIKRMSDYCRGCAYKVSESTTDDACPFNALYWHFLMRHGELLRGNQRMGMI
YKNLDRMPESKQQALWQRGQLLLATLDKGESL
NT seq
1539 nt
NT seq
+upstream
nt +downstream
nt
atgaatgctacccgccgactgtgcctcatcttgggcgaccaattgtcttttgaccatgct
tcattgcagggcctggataccgaaaacgacatcgtgctgctggtcgaggtgatggaggaa
gccagccatgttccccatcatccgcaaaaaatcgttctggttttcagtgccatgcgccat
ttcgccgaggctctgcagcagcgtggaatccgggtgcagtacgtcaagctcgatgacccg
aacaacagcggatctgtgccaaatgaattacggcgctgggaagcactcctgcagcctgat
gaaatccatatgacggagtgcggcgattggcgtcttgagcattcactcagggcatgtggc
gcgggcatccagtggcatggcgacgcgcgctttctctgctcgcgccctgagttttccgcc
tgggcgaatgccaaaaagcagctgcgcatggaatatttttaccgagagatgcggcgcaag
agcgggttgttactcaacggcgatggcagcccggtcgggggcgcctggaactttgatgca
gaaaaccgcaaggcgctgcccaaaggcatcaagccgccctcgcccgcccgcttctcaccc
gatgctattacccgggatgtactggagttggtggcaaaaaacttctccacccactatggc
accctcgatacattcgactatccggttactcacgcccaggctcaggcattgtggagctac
ttcctggactggggcctggcagccttcggcgattatcaggatgccatggccagcgacgag
ccgtttctgtttcatgcccgcatcagtgctgcgctcaatattggcttgctggatgttcgc
cagctgtgcagcgatgtggagtccgcgtactggtcgggcagcattgcactcaatgccgcc
gaaggctttattcgccaactcatcggctggcgggaatacgtgcgtggggtttactggctg
aagatgcctgactatgccgatggcaatgtattcggcaacacccggtcgcttccagagttc
tactggaccggcgacacgaaaatgaactgcatgagccaagccatcggccaaagcctcgaa
catgcctatgctcaccatatccagcggctgatggtgaccggcaatttcgccctgctcgcc
ggcatcctgccaagccaaatatgcgagtggtacctggccatctacatggatgccttcgac
tgggtggagttgcccaacactctgggcatggtcatgcacgccgatggcggctatctgggg
tccaagccttactgtgccagcggccagtacatcaagcgcatgtccgactattgccgtggc
tgcgcttacaaagtgagcgaaagcaccaccgatgacgcctgccctttcaacgcgctctat
tggcacttcctgatgcgtcacggtgagcttttgcggggcaatcagcgcatgggcatgatt
tataaaaaccttgaccggatgcctgaatccaaacagcaggcgctgtggcagcgaggccag
ttgttgcttgccacactggataaaggcgagtcactttga
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