Pseudomonas psychrophila: G5J76_16680
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Entry
G5J76_16680 CDS
T06988
Name
(GenBank) transglycosylase SLT domain-containing protein
KO
K08309
peptidoglycan lytic transglycosylase [EC:
4.2.2.29
]
Organism
ppsh
Pseudomonas psychrophila
Brite
KEGG Orthology (KO) [BR:
ppsh00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
ppsh01011
]
G5J76_16680
Enzymes [BR:
ppsh01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.29 peptidoglycan lytic transglycosylase
G5J76_16680
Peptidoglycan biosynthesis and degradation proteins [BR:
ppsh01011
]
Peptidoglycan biosynthesis and degradation
Lytic transglycosylase
G5J76_16680
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Paralog
Gene cluster
GFIT
Motif
Pfam:
SLT
Rod-binding
Transglycosylas
Motif
Other DBs
NCBI-ProteinID:
QIE33790
LinkDB
All DBs
Position
complement(3723318..3724436)
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AA seq
372 aa
AA seq
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MSITQISQHRKSGQESSADVAVPRQARLENVAEQFEAMFLQQILKQMRKAGDVLSEGSPL
RSRQGDTLREFHDEALAEKLAGHRKTGIADMLVKQLSPGMPSTSPAAPAQSGQCGAPVAP
AGLLAANKALTHVRAAHHDLPSAAPKPQRVDSLLAPIVNTWQRGIDSLGKGAAGLVALVE
KVIQHESGGRVAVVSPKGARGLMQLMPGTAREMAQELNLHYSEQRLTRDGEYNKQLGTAY
LDKLLKRYDGATALAVAAYNAGPGRVDEWLKSNGDPRKGTISVSQWVERIPFKETRNYTR
SILADLGQTGVSPRAPSATSRSGPIDDLVFKPGAVPVASSTQDLTSTVSRAAELRSPAFA
QNMRVARKEIET
NT seq
1119 nt
NT seq
+upstream
nt +downstream
nt
atgagcattacccaaatttcgcaacaccgaaaatcggggcaggagtcttctgccgatgtg
gccgtcccacgccaggcacgtcttgaaaatgtggcggagcagttcgaggccatgttcttg
cagcagatcctcaagcaaatgcgcaaggcgggcgatgtgttgtccgagggcagcccattg
cgcagccgccagggcgacaccttgcgtgagttccacgacgaagcgctggccgaaaagctg
gccggccatcgcaaaaccgggattgccgacatgctggtcaagcagctgtctccgggcatg
ccgtccacatcccccgcggccccggcccagagcgggcaatgtggcgcgcctgtggcaccg
gctggcctgctggcagccaacaaggcgctgacccatgtgcgggcagcccaccatgatttg
ccgtctgctgccccgaaaccacagagggtcgacagcttgctggcacccatcgtcaacacc
tggcagcgcggtatcgacagccttggcaagggggctgccgggttggtggcgctggtggaa
aaagtcattcagcacgagtcgggcgggcgggttgcggtggtctcgcccaagggcgcccgt
ggcttgatgcaactgatgccgggaacggcccgggaaatggcccaggagttgaacctgcac
tacagcgagcagcgcctgacccgtgatggcgagtacaacaagcaattgggtacggcgtat
ctggacaaactgctcaagcgctatgacggcgctacggcgctggcggtggcggcgtacaac
gccgggcccgggcgtgtggatgagtggctcaagagcaatggcgacccgcgcaagggcacg
atcagtgtcagtcagtgggtcgagcgtattccattcaaagaaacccgcaactacacccgt
tcgattctggccgaccttggccagaccggtgtgtcgccgagggcgccgtctgctacttcg
cgcagcgggcctattgatgacctggtatttaagccgggcgccgttccggtcgcctcaagc
acacaggacctcacttccaccgtcagccgtgcagccgaacttcgttcaccggcctttgcc
cagaacatgcgggttgcgcgcaaggagattgaaacatga
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