Pseudomonas psychrophila: G5J76_16750
Help
Entry
G5J76_16750 CDS
T06988
Name
(GenBank) FliA/WhiG family RNA polymerase sigma factor
KO
K02405
RNA polymerase sigma factor FliA
Organism
ppsh
Pseudomonas psychrophila
Pathway
ppsh02020
Two-component system
ppsh02025
Biofilm formation - Pseudomonas aeruginosa
ppsh02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
ppsh00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
G5J76_16750
09140 Cellular Processes
09145 Cellular community - prokaryotes
02025 Biofilm formation - Pseudomonas aeruginosa
G5J76_16750
09142 Cell motility
02040 Flagellar assembly
G5J76_16750
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ppsh03021
]
G5J76_16750
09183 Protein families: signaling and cellular processes
02035 Bacterial motility proteins [BR:
ppsh02035
]
G5J76_16750
Transcription machinery [BR:
ppsh03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
G5J76_16750
Bacterial motility proteins [BR:
ppsh02035
]
Flagellar system
Flagellar assembly proteins
Stator
G5J76_16750
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r4
Sigma70_r2
Sigma70_r4_2
Sigma70_r3
UPF0122
Motif
Other DBs
NCBI-ProteinID:
QIE33803
LinkDB
All DBs
Position
complement(3736015..3736767)
Genome browser
AA seq
250 aa
AA seq
DB search
MNNHSLVDHGSSGADHCPQTLTPDVEQHWILSYLPLVKRIVNQLSLQASQVLDREDMEQI
GLMGLLQGLRRYGTPDEQFGRFAALRVRGAILDELRRLDWRPRQVRQQAHKVRDALRSLT
RQLGRAPRDEEVLKATGLSETQYQGYLQAEAAEAIESLDTLLCDGSQDFQHSGRGVEERV
LNERLLAQALDPLNERERLVLTLYYQHELSLKEIGLVLDISDARVCQISKQAIEKAHHFL
TKSNVTCRKF
NT seq
753 nt
NT seq
+upstream
nt +downstream
nt
atgaacaatcatagtttggtcgatcacggatcgagtggcgcagatcactgcccgcaaaca
ctgactccggatgttgagcagcactggatcttgagctacttgccgctggtcaagcgcatt
gtcaatcagctgtcgctacaggccagccaggtgctggaccgtgaggacatggagcagatt
ggcctgatgggcctgctgcaggggttgcgccgctacggcaccccggatgagcagtttggg
cgctttgccgccctgcgtgttcgcggggcgattctggatgaactgcgtcgcctggactgg
cgcccccggcaagtgcgccagcaggcgcacaaagtgcgcgacgccctgcgcagcctgacc
cggcaattgggtcgagcaccccgtgatgaagaagtgctcaaggccacggggctgagcgaa
acacagtatcaaggctacttgcaggcagaagcggccgaagccatcgaaagcctcgatacc
ttgctgtgtgatggcagtcaggactttcaacattcaggtcgcggtgttgaggaacgtgtg
ctcaacgagcgcctgttggctcaggcactggacccgctcaacgagcgcgagcgcctggtg
ctgacgctttactaccagcatgagttgagcctcaaggaaatcggcctggtactcgacatc
agcgatgccagggtctgccagatcagcaagcaggcgatcgagaaggctcatcatttttta
accaagagtaatgtgacgtgcagaaaattttag
DBGET
integrated database retrieval system
