Pseudomonas psychrophila: G5J76_17965
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Entry
G5J76_17965 CDS
T06988
Name
(GenBank) ABC transporter substrate-binding protein
KO
K02035
peptide/nickel transport system substrate-binding protein
Organism
ppsh
Pseudomonas psychrophila
Pathway
ppsh02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
ppsh00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
G5J76_17965
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
ppsh02000
]
G5J76_17965
Transporters [BR:
ppsh02000
]
ABC transporters, prokaryotic type
Peptide and nickel transporters
Peptides/nickel transporter
G5J76_17965
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SBP_bac_5
Motif
Other DBs
NCBI-ProteinID:
QIE34032
LinkDB
All DBs
Position
complement(4010092..4011702)
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AA seq
536 aa
AA seq
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MKTAFSTVHMSLLAAVLALGATGAVNAKTPADQLIVGMSMVNLFSIDPANAPGLDASGVN
ANLYDTLIKRDQGNPERHVPQLAERWEVSEDGKQVTFHLRQDVKFHSGNSLTAEDVAWSL
YRVMKLNFGLATTWKAYGYNVDNIQSLIRATDEHTLVIDLPQVMDPLLLVDSLAISPSAV
VVDRVTALAHEKNGDLGAGWLVTNEAGSGPFVLTKWSANDSLLLTRFDGYWGGAAKLKRV
VVRHMTESQSLRLMLERGDLDLAYGMAAPDIRAIDGSPKLQVQSLPRGTMYYVAMSMKQP
EFAKPKVREAVRNLIDYKGLDEQVMPYYGKLNQQPMQLSLEARLPDPGYHMDVAEAKKLL
AEAGYPQGFTTTIRTLSEPPFIDIAARLQSTLAEGGIKASIVTGTGNQVYGAMRARNFDI
IVARGAERYPHPYFSLRTFVYNPDNSDDAGLPNFQGWRASFFSPQINSLIDKAGVERDAS
QRVSLYHQAQNLYDQEVGPIMMISQMTDTVVSASDIKGFTGDDAEATRYLGVYKER
NT seq
1611 nt
NT seq
+upstream
nt +downstream
nt
atgaagactgcattttcgacagtgcatatgagtctgctggcagctgttctggcgttgggc
gcgacgggcgcggtcaatgccaagaccccggccgaccagctgattgtcggcatgagcatg
gttaatttgttctccatagacccggccaatgcgcccggtcttgacgcctcgggcgtcaat
gccaacctctacgacaccctgattaagcgtgaccaaggcaaccccgagcgtcacgtgccg
cagttggccgagcgctgggaggtcagtgaagacggcaagcaggtgacctttcatttgcgc
caggacgtgaagttccactccggcaattcgctgaccgccgaagacgtggcctggtcgctg
taccgggtgatgaaactcaactttggcctggccacgacctggaaggcttacggctacaac
gtcgacaacattcagtcgctgatccgcgccacagatgagcacaccctggtcattgacctg
ccgcaggtcatggacccactgctgttggtggactccctggcgatctcgcccagtgccgtg
gtggtggaccgcgtgacggccctggcccatgaaaagaacggtgatcttggcgcaggctgg
ctggtgaccaacgaagcgggcagcggtcctttcgtgctgaccaagtggagcgccaatgac
tcgctgttattgacccgctttgatggctactggggtggcgcggccaagctcaagcgtgtg
gtggtgcggcacatgaccgagtcccagtccttgcgtctgatgcttgagcgtggggatctg
gacctggcctacggcatggcggcgccggacattcgcgccatcgacggttcaccgaagctt
caggtgcaatcgttgccccggggcaccatgtactacgtggccatgagcatgaagcagccc
gagtttgccaaacccaaggtccgtgaagcggtgcgcaacctcatcgactacaagggcctg
gatgagcaggtgatgccttactacggcaagctcaaccagcaaccgatgcaattgagcctg
gaagcacgcttgccggatcctgggtatcacatggacgtggcggaggcgaaaaaactgctg
gccgaagccggttacccgcagggtttcaccaccaccatccgcaccttgtccgagccgccc
tttattgacatcgctgcgcgcctgcaatcaaccctggccgaaggcgggatcaaggccagc
atcgtcaccggtacgggtaaccaggtgtatggcgcgatgcgtgcgcgcaacttcgacatc
atcgtcgcccgtggcgccgaacgttacccgcatccgtacttcagcttgcgcaccttcgtc
tacaaccccgacaacagcgatgacgcaggcttgccaaatttccagggctggcgtgcttcg
ttttttagcccgcagatcaatagcctgatcgacaaggccggggtggagcgtgacgccagc
cagcgggtgagcctgtaccaccaggcgcagaacctctacgaccaggaagtgggcccgatc
atgatgatttcgcaaatgaccgacaccgtcgtgagcgcttccgatatcaaggggtttacg
ggtgatgacgccgaggccacccgttatctgggggtctacaaggaacgctga
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