Pseudomonas psychrophila: G5J76_18965
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Entry
G5J76_18965 CDS
T06988
Name
(GenBank) sigma-54-dependent Fis family transcriptional regulator
KO
K10943
two-component system, response regulator FlrC
Organism
ppsh
Pseudomonas psychrophila
Pathway
ppsh02020
Two-component system
ppsh02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
ppsh00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
G5J76_18965
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
G5J76_18965
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02022 Two-component system [BR:
ppsh02022
]
G5J76_18965
02035 Bacterial motility proteins [BR:
ppsh02035
]
G5J76_18965
Two-component system [BR:
ppsh02022
]
Other families
FlrB-FlrC (polar flagellar synthesis)
G5J76_18965
Bacterial motility proteins [BR:
ppsh02035
]
Flagellar system
Flagellar assembly proteins
Others
G5J76_18965
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_activat
Response_reg
Sigma54_activ_2
HTH_8
AAA_5
AAA_16
AAA_2
MCM
AAA
FleQ
AAA_19
MerR
HTH_20
HTH_30
AAA_3
nSTAND3
RsiG
HTH_24
HTH_23
HTH_11
ATPase
Myosin_head
HTH_28
DUF2249
Motif
Other DBs
NCBI-ProteinID:
QIE35310
LinkDB
All DBs
Position
complement(4199038..4200423)
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AA seq
461 aa
AA seq
DB search
MRINVLLVEDDHALREALADTLLLAGYGFLAVNSGEEALAAVTSQAFSLVISDVNMPGMD
GHQLLARLRTSQPQLPVLLMTAHGAVERAVDAMRQGAVDYLVKPFEPRTLLDLVARHALG
SLGVADTEGPVAVEPASVQLLELAARVARSDATVLISGESGTGKEVLARYIHQHSRRIDQ
PFVAINCAAIPDNMLEATLFGHEKGAFTGAIAAQAGKFEQADGGTLLLDEISEMPLGLQA
KLLRVLQEREVERVGGRKPIVLDIRVVATTNRDLAGEVAAGRFREDLFYRLSVFPLAWSP
LRERTADILPLAERLLAKYISKMKHTAVRFSADAQACLSAYSWPGNVRELDNAIQRALIL
QQGGMIQAADFCLAGPVACAPLPSLSRIEPLPVDAVEPAGALGDDLRRREFQMIIDTLRA
ERGRRKEASERLGISPRTLRYKLAQMRDAGMDVEAYLFASG
NT seq
1386 nt
NT seq
+upstream
nt +downstream
nt
atgcgaattaacgtgctgttggtcgaagacgatcatgcgttgcgcgaagcgctggcggac
acgctattgctggccggttacggctttctggcggtcaactcgggggaagaagcactggcg
gcggtcacgtcgcaagcgttcagtctggtgatcagtgacgtcaatatgccgggcatggat
ggccatcagttgctcgcccgcctgcgcaccagtcagccgcaattgccggtgttgctgatg
acggcccacggcgccgttgagcgagcggtggacgccatgcgccaaggggcggtggattat
ctggtcaagccgtttgagcccaggaccttgctcgatttggtggcccgccatgccctgggc
agtctcggtgtggcggacacagaaggtccggtggcggttgagccggccagtgtgcagcta
ttggagttggcggcgcgggtggcgcgcagtgatgccacggtgctgatctcgggtgagtca
ggtaccggtaaggaggtcctggcgcgatacatccaccagcattcccgtcggattgatcag
ccgtttgtggcgatcaactgcgcggccatccccgacaacatgctcgaagccacgctgttt
ggtcatgaaaaaggcgcgtttaccggtgccattgcggcccaggcgggcaagtttgagcag
gcggatggcggcaccttgctgctcgatgaaatttccgagatgcccttgggtctgcaggcc
aaactgctgcgtgtgctgcaagagcgtgaagtggagcgagtgggtgggcgcaagccgatt
gtgctggatatccgcgtagtcgccaccaccaaccgtgatctggcgggcgaagtggcggct
gggcggtttcgcgaggatttgttctatcgcctttcagtgtttccgctggcctggagcccg
ctgcgcgagcgtaccgccgacatcctgcccttggctgagcggctgctggccaagtacatc
agtaaaatgaagcacaccgcagtaaggttttcggccgatgcacaggcgtgcctgagcgct
tactcgtggcccggtaatgtgcgcgagctcgataacgcgattcagcgggcgttgattttg
cagcagggcggcatgatccaggcggcagatttttgcctggccgggccggtggcttgcgcg
cccttgccgtctttgtcgcgtattgaaccgttgccggtcgatgccgtggagccggcaggg
gccttgggcgatgatctgcgccggcgtgagttccagatgatcatcgacaccttgcgtgcc
gaacgtggtcggcgcaaggaagcctccgagcgcctgggcatcagtccgcgtaccctgcgc
tacaagctggcgcagatgcgcgatgcggggatggatgttgaggcttatctgtttgcttca
ggttga
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