Pseudomonas psychrophila: G5J76_21100
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Entry
G5J76_21100 CDS
T06988
Name
(GenBank) long-chain-fatty-acid--CoA ligase
KO
K01897
long-chain-fatty-acid---CoA ligase [EC:
6.2.1.3
]
Organism
ppsh
Pseudomonas psychrophila
Pathway
ppsh00061
Fatty acid biosynthesis
ppsh00071
Fatty acid degradation
ppsh01100
Metabolic pathways
ppsh01212
Fatty acid metabolism
ppsh02024
Quorum sensing
ppsh04146
Peroxisome
Module
ppsh_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
ppsh00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
G5J76_21100
00071 Fatty acid degradation
G5J76_21100
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
G5J76_21100
09145 Cellular community - prokaryotes
02024 Quorum sensing
G5J76_21100
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
ppsh01004
]
G5J76_21100
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
ppsh04147
]
G5J76_21100
Enzymes [BR:
ppsh01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
G5J76_21100
Lipid biosynthesis proteins [BR:
ppsh01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
G5J76_21100
Exosome [BR:
ppsh04147
]
Exosomal proteins
Exosomal proteins of breast milk
G5J76_21100
Exosomal proteins of breast cancer cells
G5J76_21100
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C
AMP-binding_C_2
Legum_prodom
AMP-binding_C_3
Motif
Other DBs
NCBI-ProteinID:
QIE34606
LinkDB
All DBs
Position
complement(4666484..4668172)
Genome browser
AA seq
562 aa
AA seq
DB search
MQPDFWNDKRPTGVPLDIDMTTYKSVVDVFERSCKKFADRPAFSNLGVTISYAELERYSA
AFAGYLQEHTDLKPGDRIAVQMPNTLQYPIAVFGAMRAGLVVVNTNPLYTSREMHHQFKS
AGIRALVYLNMFGKRVQEVLQEIEIDYLIEAKMGDMMPAVKGWITNLVVDKVKKLVPAYQ
LPQAIPFKSVLRRGAGQVIRPLTVTLDDTAVLQYTGGTTGLPKGAMLTHGNLIANMQQLR
ACLSQHDADGQPMLKDGREIMIGPLPLYHIYAFTVNCMGMMVTGNHNVLITNPRDIKGFI
KELKNWKFTGFLGLNTLFVALMDHPDFKTVDFSALKITNSGGTALVKATAERWEKLTGCR
IVEGYGLTETSPVASANPCGSLARLGTVGMPVPGTAMKVISDEGVDLGLGERGELCVKGP
QVMKGYWQNPEATAEVLDAEGWFKTGDIAVIDPDGFVRIVDRKKDLIIVSGFNVYPNEIE
DIVMAHPKVANCAVIGVPDERTGEAVKLFVVPRAGGVTVEELKAYCKDNFTGYKVPKQIV
LRDSLPMTPVGKILRRELRDIA
NT seq
1689 nt
NT seq
+upstream
nt +downstream
nt
atgcaacctgatttctggaatgacaaacgtccaaccggtgttccgctggatatcgacatg
acgacctacaagtcggtcgttgacgtgtttgagcgctcctgcaaaaaattcgcggatcgc
cctgccttcagcaatttgggtgtgaccatcagctacgccgagcttgagcgctacagtgcc
gcctttgccggttatctgcaggaacacaccgatctcaagcccggtgatcgtatcgccgta
caaatgcccaataccctgcagtacccgattgccgtctttggtgccatgcgggctgggctg
gtggtggtcaacaccaacccgctctacacctcgcgcgagatgcaccatcagttcaagagc
gcgggcattcgtgcgctggtgtacttgaacatgttcggcaagcgcgttcaggaagtactg
caagagatcgagatcgactacctgatcgaagccaaaatgggcgacatgatgcccgccgta
aaaggctggatcacaaacctggtggtcgacaaggttaaaaagctggtgccggcttatcag
ttacctcaggcgatcccttttaaaagtgttttgcgccgtggtgctggccaggttatccgg
ccactgaccgtaacgctggatgacaccgcagtgctgcaatacaccggcggtacaaccggt
ctgcccaagggggcaatgctgacccatggcaatctgatcgccaatatgcagcaattgcgt
gcctgcctctcccagcatgatgctgacgggcagccgatgctcaaggacggtcgcgagatc
atgattggcccgctgccgctctaccatatctatgcattcaccgttaactgcatgggcatg
atggtcaccggcaaccacaacgtcctgatcaccaatccgcgtgacataaaaggttttatc
aaggaactcaagaactggaaattcaccggttttctgggtctcaacaccttgtttgtcgcg
ctcatggatcaccctgatttcaagacggtggatttctccgcgcttaaaatcaccaactcg
ggcggtacggcgctggtcaaggccaccgctgaacgttgggaaaaactcactgggtgccgc
attgtcgaaggttacggcctgactgaaacctcgcccgtggccagtgccaacccctgcggg
tcactggcaaggctggggacggtggggatgccggttcccggtacagccatgaaagtaatc
agcgacgaaggtgtcgacttgggcctgggcgagagaggcgaactctgcgtcaaaggtccg
caagtgatgaaaggctactggcaaaacccagaagccacagccgaagtactggatgccgag
ggctggttcaagaccggtgatattgcggtgattgatccggatggctttgtccgtattgtc
gatcgcaaaaaagacctgatcatcgtctccggtttcaacgtgtaccccaacgaaattgaa
gacatcgtgatggcccatccaaaagtggccaattgcgcggtcattggcgtaccggacgag
cgcaccggggaggcggtcaaactgtttgttgttcctcgcgctggcggggtgaccgttgaa
gagctcaaggcctactgcaaggacaacttcaccggttacaaggtgcccaagcaaatcgtt
ttgcgcgattctttgcccatgacaccggtgggcaaaatcctgcgtcgcgagttacgtgat
atcgcctga
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