Pseudomonas psychrophila: G5J76_21145
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Entry
G5J76_21145 CDS
T06988
Name
(GenBank) MurR/RpiR family transcriptional regulator
KO
K19337
RpiR family transcriptional regulator, carbohydrate utilization regulator
Organism
ppsh
Pseudomonas psychrophila
Brite
KEGG Orthology (KO) [BR:
ppsh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ppsh03000
]
G5J76_21145
Transcription factors [BR:
ppsh03000
]
Prokaryotic type
Helix-turn-helix
Other families
G5J76_21145
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Gene cluster
GFIT
Motif
Pfam:
HTH_6
SIS
SIS_2
HTH_31
CHRD
HTH_AsnC-type
Motif
Other DBs
NCBI-ProteinID:
QIE34615
LinkDB
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Position
4675355..4676224
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AA seq
289 aa
AA seq
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MDRVRNLLEQIKGRLEDLNKAERKVAEIILQNPQQATRFSIAALAQAASVSEPTVNRFCR
SFGVSGYPELKLQLAQSLASGAAYVSRAVEADDNPEAYTQKIFGSAIASLDSACQALDPN
LISRAVDLLIQARQIHFFGLGASAPVALDAQHKFFRFNLAVTAHADVLMQRMIASVAHTG
ELFVIISYTGRTRELVEVARIARANGASVLGLTAENSPLAKASTLSLNIPLPEDTDIYMP
MTSRIIQLTVLDVLATGMTLRRGVDFQPHLRKIKESLNASRYPVGDEFN
NT seq
870 nt
NT seq
+upstream
nt +downstream
nt
atggaccgcgtgcgaaatttactcgaacagatcaagggccgcctcgaagacctgaacaag
gccgagcgcaaagtggctgaaatcattttgcagaacccgcagcaagcgacccgcttcagc
atcgcggccctggctcaggcggcctcggtcagcgagcctacagtcaaccgtttctgccgt
tcatttggcgtcagcggttatccggaattaaagctgcaactggcacagagcctggccagt
ggtgccgcgtatgtcagccgtgcggtcgaggccgacgataatcccgaagcctacacccaa
aagattttcggcagcgccattgcctccctggacagcgcttgccaggcattggacccgaac
cttatcagccgcgccgtcgacttgctgatccaggctcggcaaatccactttttcggcctg
ggcgcttcggctccagtggcgctggatgcgcaacacaagttcttccgtttcaacctggcg
gtcaccgcccatgccgacgtattaatgcaacgcatgatcgcgtccgtggcccacaccggt
gagttgttcgtcattatttcctatacaggtcgcacccgtgagctggtggaagtggctcgt
attgcgcgagccaacggtgcctcggtactgggcctgacagcagaaaactcgccactggcc
aaagccagcaccttgagcctgaatattccgctgcctgaagacaccgacatctatatgccg
atgacctcgcgcatcatccagctcaccgtgctcgacgtactcgccaccggtatgacccta
cgccggggggtggacttccagccgcacctgcgcaaaatcaaggaaagcctcaacgccagc
cggtacccggtaggcgatgaattcaactga
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