Pseudomonas psychrophila: G5J76_22050
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Entry
G5J76_22050 CDS
T06988
Symbol
recO
Name
(GenBank) DNA repair protein RecO
KO
K03584
DNA repair protein RecO (recombination protein O)
Organism
ppsh
Pseudomonas psychrophila
Pathway
ppsh03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
ppsh00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
G5J76_22050 (recO)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ppsh03400
]
G5J76_22050 (recO)
DNA repair and recombination proteins [BR:
ppsh03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
G5J76_22050 (recO)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
G5J76_22050 (recO)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RecO_C
RecO_N
Motif
Other DBs
NCBI-ProteinID:
QIE34791
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All DBs
Position
complement(4882623..4883312)
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AA seq
229 aa
AA seq
DB search
MSSKAPTAQLAYVLHSRPYRETSALVDFITPQGRLRAVLRSARGKAGTLARPFVPLEIEF
RGRGELKNVGRMESAGISTWLNGEALFSGLYLNELLVRLLPAEDPHPAVFDHYAATLLAL
AEGRPLEPLLRAFEWRLLDDLGYGFSLTHDIHGEPVAVDGMYRLQVDAGLERIYLVQPGL
FHGAELHGMAEADWTVPGALSAAKRLMRQALAVHLAGKPLASRELFRKP
NT seq
690 nt
NT seq
+upstream
nt +downstream
nt
atgtccagcaaagcccccacagcccaactcgcttacgttctgcacagtcgcccctatcgc
gaaaccagtgctctggtggatttcatcacgccacaggggcgtctgcgggcggtgttgcgc
agtgcgcggggcaaggcgggcacgttggccaggccctttgtcccgctggaaatcgagttt
cgagggcggggcgagttgaaaaatgtcgggcgcatggagagcgccggtatttcaacctgg
ctcaatggcgaagccttgttcagcggtctctatctcaacgaattgctggttcggttgctg
cccgccgaagaccctcacccggcggtcttcgatcactatgcggcaacgcttttagcgttg
gcagaagggcgccctctggagcctctactgcgggcgttcgagtggcgcttgctggacgat
ttgggctatggcttttcgctgactcatgacattcacggcgagccggtggccgtcgatggc
atgtaccgcttgcaggtagatgctgggcttgagcggatttatctggtgcagcccggactg
tttcatggcgcagaactgcacgggatggccgaggctgactggaccgttcctggcgccttg
tctgctgccaagcgcctgatgcgtcaggcactggccgtgcatttggctggcaagcccctg
gccagtcgcgagttgtttcgcaagccctga
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