Pseudomonas psychrophila: G5J76_23275
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Entry
G5J76_23275 CDS
T06988
Symbol
mrcB
Name
(GenBank) penicillin-binding protein 1B
KO
K05365
penicillin-binding protein 1B [EC:
2.4.99.28
3.4.16.4
]
Organism
ppsh
Pseudomonas psychrophila
Pathway
ppsh00550
Peptidoglycan biosynthesis
ppsh01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
ppsh00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
G5J76_23275 (mrcB)
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
ppsh01003
]
G5J76_23275 (mrcB)
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
ppsh01011
]
G5J76_23275 (mrcB)
Enzymes [BR:
ppsh01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.99 Transferring other glycosyl groups
2.4.99.28 peptidoglycan glycosyltransferase
G5J76_23275 (mrcB)
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.16 Serine-type carboxypeptidases
3.4.16.4 serine-type D-Ala-D-Ala carboxypeptidase
G5J76_23275 (mrcB)
Glycosyltransferases [BR:
ppsh01003
]
Polysaccharide
Bacterial polysaccharide (excluding LPS)
G5J76_23275 (mrcB)
Peptidoglycan biosynthesis and degradation proteins [BR:
ppsh01011
]
Peptidoglycan biosynthesis and degradation
Glycosyltransferase/DD-Transpeptidase (Class A PBP)
G5J76_23275 (mrcB)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Transgly
UB2H
Transpeptidase
UvrB_inter
PBP_1A_C
PBP1_TM
Motif
Other DBs
NCBI-ProteinID:
QIE35009
LinkDB
All DBs
Position
complement(5134079..5136403)
Genome browser
AA seq
774 aa
AA seq
DB search
MTRTRSPRSRSKRPSGGLRPWLGWAIKLSLVGLVVLAGFAVYLDAIVQEKFSGKRWTIPA
KVYARPLELFVGQKLSKNDFLTELDALGYRRESVVNGPGAAAVSGNTVDLNTRGFQFYEG
AEQAQPVRVRFSGDYVAELSSTNGSKLPVVRLEPLLIGGLYPKNLEDRILINIDQVPPFL
LETLVTVEDRDFYHHFGVSPKSIARAMWVNTSSGQMRQGGSTLTQQLVKNFYLTNERSLS
RKLTEAMMALLLEMHYDKREILEAYLNEVFVGQDGQRAVHGFGLASQFFFSQPLAELKLH
QVALLVGMVKGPSSYNPRRNPERALVRRNLVLDLLEQQGVATPEQVAAAKKMPLGVTTRG
SLADSSFPGFLDLVKRQLREDYRDEDLTEEGLRIFTSFDPILQMKSEAAMGETFKRLTGR
KGSDEVEAAMVVTNPETGEVQALIGSRAPRFAGFNRALDAVRPIGSLIKPAVYLTALERP
SQYTLTSWLSDDPLSIKGADGQVWKPQNYDRRSHGTVFLYQSMMNSYNLGTVRLGQEVGV
PNVLKTLARLGVERQFPAFPSMLLGAGALSPMEVATMYQTLANGGFNTPMRGIRSVLTAE
GEPLKRYPFQIQQRFDPGSIFLIQNAMQHVMREGTGRSVYNVLPRNLALAGKTGTSNDSR
DSWFAGFSQDLLAVVWLGRDDNGKTPFTGATGALQVWTSFMKKADPLPLDMPQPDNIVQA
WIDPHTGQGSDAGCPGAVQMPYIRGSEPPAGASCGGQEPASGEAVMDWVKGWLN
NT seq
2325 nt
NT seq
+upstream
nt +downstream
nt
atgactcgtacccgatctcctcgttctcgttccaaacgtccttctggcggccttaggccc
tggctgggctgggcaatcaagctcagtctggtcggtctggtggtgctggcaggttttgcc
gtctatctggatgccatcgtgcaggagaagttctccggcaagcgttggacaatcccggcc
aaggtgtatgcccggccgcttgagctgttcgtcggccagaagctgagcaagaacgacttc
ctgacggaactcgatgcgctgggctatcgccgtgaaagcgtggtcaatggtcctggagct
gctgcggtcagtggcaacacagtcgacctcaatacacgtggcttccagttttatgaaggt
gccgaacaggcacagccggttcgtgtgcgtttctctggcgactatgtagcagagctttca
tcgaccaatggttccaagctgcctgtagtgcgtcttgagccgttgctgatcggtggcctg
tatccgaaaaatcttgaagaccggatcctgatcaatatcgatcaagtgccgccgtttctg
cttgaaacgctggtaacagtagaagaccgcgatttttatcatcactttggggtgtcgccg
aagtcgattgcccgtgccatgtgggttaatacgtcatccgggcaaatgcgccagggcggc
agtaccctgactcaacagctggtcaagaacttctatctgaccaacgagcgcagccttagt
cgcaagctaactgaggcgatgatggcgttgctgctggaaatgcattacgacaagcgcgaa
atccttgaggcgtatctcaacgaagtgtttgtcggtcaggacgggcagcgcgccgtgcat
ggctttggcctcgccagccagttcttcttcagtcagccgctggccgaactcaagttgcat
caggtggcgttgttggtggggatggtcaaagggccatcttcttataacccgcgtcgtaat
cccgagcgggcgctggtacggcgtaacctggtgctcgatttgctggagcaacaaggcgtt
gcaacgcccgagcaagtggctgcggcgaaaaaaatgccattgggcgtgaccacgcgcggt
agcctggcagacagttccttcccgggtttcctggacctggtcaagcgccagttacgtgaa
gactatcgcgatgaagacttgaccgaagaggggttgaggattttcaccagcttcgacccg
atcctgcagatgaagtctgaagccgcaatgggtgagaccttcaaacgtctgaccgggcgc
aagggttcggatgaagtggaagccgcaatggtggtcactaatccggaaaccggcgaggtt
caggctctgatcggcagtcgtgcaccgcgctttgcaggctttaaccgtgcgcttgatgcg
gtacggcctattggttcgttgatcaaacctgcggtgtatctcacggcgcttgaacggcca
agtcagtacacgctgaccagttggctgtcggatgatccgctgtcgatcaaaggtgctgac
ggtcaggtctggaagcctcagaactatgaccgtcgctctcacggtacggtttttctctac
cagtccatgatgaactcctacaacctcggtacggtaaggctggggcaggaagtgggtgtg
cccaacgtgctcaagaccttggcgcgactgggggtagagcgtcagttcccggcattcccg
tccatgttgctgggtgccggtgcattgagcccgatggaagtggcgacgatgtatcagacc
ttggccaacggcggctttaatacgccgatgcgcggaattcgcagcgtactgaccgccgag
ggggagccgctgaaacgttatccgttccagattcagcaacgcttcgatccgggctccatt
ttcctgatccagaatgcgatgcagcatgtgatgcgcgaaggtacaggacgttcggtttat
aacgtgctgcccaggaacctcgcattggctggtaagaccggtaccagtaacgattcgcgt
gacagctggtttgcagggtttagccaggacttgctggcggtggtctggttgggtcgcgac
gacaacggcaaaacgccttttaccggcgcaaccggagcactgcaggtgtggaccagcttc
atgaagaaggctgacccgctgccgctcgatatgcctcagcccgataacatcgttcaggcc
tggattgatccgcatacggggcaaggatctgatgccggctgccctggcgcggtacagatg
ccgtatattcgcggcagtgagccgccagcaggggccagttgtggcgggcaagagcctgct
tcaggtgaggccgtgatggattgggtcaagggctggttgaattaa
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