Pseudomonas psychrophila: G5J76_23350
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Entry
G5J76_23350 CDS
T06988
Name
(GenBank) polynucleotide adenylyltransferase PcnB
KO
K00970
poly(A) polymerase [EC:
2.7.7.19
]
Organism
ppsh
Pseudomonas psychrophila
Pathway
ppsh03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
ppsh00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
G5J76_23350
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ppsh03019
]
G5J76_23350
Enzymes [BR:
ppsh01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.19 polynucleotide adenylyltransferase
G5J76_23350
Messenger RNA biogenesis [BR:
ppsh03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Others
G5J76_23350
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PolyA_pol_arg_C
PolyA_pol
PolyA_pol_RNAbd
BenE
Motif
Other DBs
NCBI-ProteinID:
QIE35024
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All DBs
Position
5151562..5152956
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AA seq
464 aa
AA seq
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MLKKLFQSFRSPKRRTQQLRSTPEVLNSSQHSLQRAQFSRYAVNIVERLQNAGYQAYLVG
GCVRDMLLNITPKDFDVATSATPEQVRAEFRNARIIGRRFKLVHIHFGREIIEVATFRAN
HPQNDEEEDSNQSSRNESGRILRDNVYGTLEEDAQRRDFTINALYYDPVSERILDYANGV
HDIRNRLLRLIGDPQQRYQEDPVRMLRAVRFAAKLNFGIEKHTAEPIRELAPMLREIPSA
RLFEEVLKLFLSGNASDTFEMLVDLQLFDPLFPASAEALEHNPTYTHTLISEALRNTDLR
IKQGKPVTPAFLFAALLWPALPARVLRLQDQGMPPIPAMQEAAHELIAEQCQRIAIPKRF
TMPIREIWDMQERLPRRSGKRADMLLDNPRFRAGYDFLLLRESAGEQTNGLGEWWTDYQD
ANDSGRRDMIRDLSNAKDDGTGPAPRKRRRTSGAKRKRSAAADE
NT seq
1395 nt
NT seq
+upstream
nt +downstream
nt
atgctgaagaagctgttccagtcattccgttctcccaagcgtcgtacgcaacaactgcgc
agcacccctgaagtgctcaacagcagccaacattcgctgcaacgtgcccagttcagccgc
tacgcggtcaacattgtcgagcgcctgcagaacgccggttaccaggcctatctggtaggc
ggttgcgtacgcgacatgctgctcaacatcacgccaaaagactttgacgtcgccacaagc
gccacgcctgaacaagtgcgcgccgagtttcgtaatgcgcgaatcatcggtcgacgtttc
aagttggtgcacatccactttggtcgcgaaatcattgaagtcgccaccttccgtgccaat
cacccgcaaaacgacgaagaggaagacagcaaccagtcctcacgcaacgaaagcgggcgc
atcttgcgcgacaacgtttacggcacacttgaagaagacgcccagcgtcgtgacttcacg
atcaatgccctgtactacgacccggtcagcgagcgcatcctcgattacgccaatggcgta
cacgatattcgcaaccgcttgctgcgcctgattggcgatccgcaacagcgctatcaggaa
gacccggtacgcatgctgcgcgcagtgcgttttgcggccaaactcaactttggcatcgaa
aaacacaccgccgagccgattcgcgaactggcgccaatgctgcgtgaaattccgtctgcg
cggttgttcgaagaagtcctcaagctgttcctctcgggtaacgcttcagacaccttcgaa
atgctggttgacctgcaattgttcgatcctctgttcccggccagcgccgaagcactggaa
cacaatccgacgtacacccacaccctgatcagcgaagccttgcgcaacaccgatctgcgg
atcaaacagggcaaaccggtaaccccggccttcctgtttgctgccttgctctggcctgcc
ctgccggcccgtgtattgcgtctgcaagatcaaggcatgccgcccattcctgcgatgcag
gaagccgcgcacgaactgatcgccgaacagtgccagcgcattgccattcccaagcgtttc
accatgccgatccgcgagatctgggacatgcaggagcgcctgccacgtcgcagcggcaaa
cgcgccgacatgttgctcgacaacccgcgcttccgtgccggctatgacttcttgctgttg
cgtgaaagcgcaggcgagcagaccaatgggctgggcgagtggtggaccgactatcaggac
gccaatgacagcggtcgccgcgacatgattcgcgacctgagcaacgccaaggatgacggc
accggccctgcaccgcgtaaacgtcgccgcaccagcggtgccaagcgcaaacgtagcgcc
gcagcggacgagtaa
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