KEGG   Pseudomonas oryzihabitans PRS08-11306: BJP27_01685
Entry
BJP27_01685       CDS       T05074                                 
Name
(GenBank) RNA polymerase subunit sigma
  KO
K23514  RNA polymerase sigma-19 factor, ECF subfamily
Organism
ppsl  Pseudomonas oryzihabitans PRS08-11306
Pathway
ppsl02020  Two-component system
Brite
KEGG Orthology (KO) [BR:ppsl00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   02020 Two-component system
    BJP27_01685
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:ppsl03021]
    BJP27_01685
Transcription machinery [BR:ppsl03021]
 Prokaryotic type
  Bacterial type
   RNA polymerase
    Sigma factors
     BJP27_01685
SSDB
Motif
Pfam: Sigma70_r4_2 Sigma70_r4 Sigma70_r2 HTH_23
Other DBs
NCBI-ProteinID: APQ10278
LinkDB
Position
complement(361907..362419)
AA seq 170 aa
MASAALERADLLTQIFQSDYRWLTERLRYRLGCRFNAEDVASESFLHLSTLPGLNEVREP
RAMLTTIANRVMYEVSRRRALEKAYLEALSFAPEHVMPSPEEQHLLLETLVAIDKALEGL
STKARKAFFYSQLDGMTYAQIGVELGVSASMVRQYMTQALTRCYAITAES
NT seq 513 nt   +upstreamnt  +downstreamnt
atggcctctgctgcgttggaaagagccgacctgctgactcagatttttcagagcgattat
cgctggttgaccgagcgcctccgctatcgactgggctgccgattcaatgctgaggatgta
gcgtctgagtcgttcctgcacctttccacgctgcccggcttgaacgaggtgcgcgaaccg
cgcgctatgctgaccactatcgccaaccgcgtgatgtatgaggtctcgcgccgccgcgcc
ctggaaaaggcctatctggaggcgttgtccttcgcccccgaacatgtcatgccgtcgccc
gaagagcagcacctcctgctggaaaccctggttgcgatcgacaaagccctggaaggcctg
tccacgaaggcacgcaaggcgttcttctacagccagctggatggcatgacctacgcgcaa
attggcgttgaactgggcgtatcggcgagtatggtgcgccagtacatgacccaggcgctg
accaggtgctacgccattaccgcggagagttga

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