Pseudomonas oryzihabitans PRS08-11306: BJP27_02025
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Entry
BJP27_02025 CDS
T05074
Name
(GenBank) ABC transporter substrate-binding protein
KO
K02035
peptide/nickel transport system substrate-binding protein
Organism
ppsl
Pseudomonas oryzihabitans PRS08-11306
Pathway
ppsl02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
ppsl00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
BJP27_02025
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
ppsl02000
]
BJP27_02025
Transporters [BR:
ppsl02000
]
ABC transporters, prokaryotic type
Peptide and nickel transporters
Peptides/nickel transporter
BJP27_02025
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SBP_bac_5
Motif
Other DBs
NCBI-ProteinID:
APQ10341
LinkDB
All DBs
Position
460303..461823
Genome browser
AA seq
506 aa
AA seq
DB search
MGFKGFVCSFALSLVLAQGQAFASKANDTLVYASDTEPENVSPYHNDVREGVILAHLAWD
DLIYRDPKTGQYLPMLATHWEQIDPLTIDFDLRQGVTFHNGDPLTADDVVFTFNYVTSPE
GKVVTQQNVNWIKSAEKLGEYRVRLHLKQPFPAALEYLANALPIYPAKYFQQVGLAGFAQ
KPVGTGPYRIVAVTSGQGVKLERNPNYFKDSPQGQPRIGHIEFRVIPDPETRLAELMTGG
VDWIWRVAPDQAAQLKAIPNVTVESGASMRIGFLSMDAQGTSSPDSPFAKLQVRQAVNHA
INRQAIASQLMGGGSQPLQVACYPEQFGCDAKAVPGYPYDPAKAKALLKAAGYPNGFSTE
LFAYRDRDVAEAIIGELRAVGIDAKLRYLKYAALRDMQRAGKVPMALLAWGSFSIADASA
STGVYFKGNADDVAKDPQVIDWLKEADTSMDPEVRKADYRKALQRIAAQAYWAPLFNYSV
NYAFNSDLAFQPYPDELPRFALAHWN
NT seq
1521 nt
NT seq
+upstream
nt +downstream
nt
atgggattcaaaggtttcgtgtgtagcttcgcgctttccctcgtcctggcccagggccag
gccttcgccagcaaggccaacgacaccctggtctacgcctccgataccgagcccgagaac
gtcagcccctatcacaacgatgtccgtgagggcgtcatcctggcccacctggcctgggac
gacctgatctatcgcgatcccaagaccggccagtatctgccgatgctggccacccactgg
gagcagatcgatccgctgaccatcgatttcgatcttcgccagggcgtgaccttccacaac
ggcgatcccctcaccgccgacgacgtggtcttcaccttcaactacgtgacctcgcccgag
ggcaaggtggtcacccagcagaacgtcaactggatcaagagcgccgaaaagctgggcgag
taccgggtccggctgcacctcaagcaaccctttcccgccgccctggaatacctggccaac
gccttgcccatctatccggccaagtacttccagcaggtgggcctggccggcttcgcgcag
aagccggtgggtaccggtccctaccgcatcgtcgccgtcaccagcgggcagggcgtcaag
ctggaacgcaatcccaactatttcaaggacagcccccagggccagccacgcatcggccac
atcgaattccgtgtcatccccgatcccgagacacgcctggccgaactcatgaccggcggc
gtcgactggatctggcgcgtggcgccggaccaggccgcgcagctcaaggcaatccccaat
gtcacggtggaaagtggcgccagcatgcgcatcggcttcctcagcatggacgcccagggc
acctcttcgccggattcgcccttcgccaagttgcaggtgcgccaggcggtcaaccacgcc
atcaaccgccaggccatcgccagccaactcatgggtggtggcagccagccgctgcaggtg
gcctgctatcccgagcagttcggctgcgatgccaaggcggtaccgggctatccctacgac
ccggccaaggccaaggcgctgctcaaggccgccggctatcccaacggcttcagcaccgaa
ttgttcgcctaccgcgatcgcgacgtggccgaggcgatcatcggtgaactgcgcgccgtg
ggcatcgacgccaagctgcgctacctgaagtacgccgccctgcgcgacatgcagcgcgcc
ggcaaggtgcccatggcgctgctcgcctggggctccttctccatcgccgatgcctcggcg
tccactggcgtctatttcaagggcaatgccgacgacgtggccaaggacccgcaggtgatc
gactggctcaaggaagccgatacctccatggacccggaggtgcgcaaggcggactaccgc
aaggcgctgcagcggatcgccgcccaggcctactgggcgcccttgttcaactactccgtg
aactacgccttcaactcggacctggccttccagccctatccggacgagttaccccgtttc
gccctggcgcactggaactga
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