Pseudomonas oryzihabitans PRS08-11306: BJP27_02285
Help
Entry
BJP27_02285 CDS
T05074
Name
(GenBank) DNA polymerase III subunit epsilon
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
ppsl
Pseudomonas oryzihabitans PRS08-11306
Pathway
ppsl03030
DNA replication
ppsl03430
Mismatch repair
ppsl03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
ppsl00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
BJP27_02285
03430 Mismatch repair
BJP27_02285
03440 Homologous recombination
BJP27_02285
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
ppsl03032
]
BJP27_02285
03400 DNA repair and recombination proteins [BR:
ppsl03400
]
BJP27_02285
Enzymes [BR:
ppsl01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
BJP27_02285
DNA replication proteins [BR:
ppsl03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
BJP27_02285
DNA repair and recombination proteins [BR:
ppsl03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
BJP27_02285
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
Motif
Other DBs
NCBI-ProteinID:
APQ10388
LinkDB
All DBs
Position
complement(518796..519530)
Genome browser
AA seq
244 aa
AA seq
DB search
MRYVVLDTETTGMPVTDGHRVIEIGGVEVIGRRLTGRHFHVYLNPDREIDEGAIAVHGIT
NDFVADKPRFAEIADSFFEFIEGAELVIHNAPFDVGFINSEFARLGVHPERADITQHCSV
LDTLVMARGRHPGQRNSLDALCKRYGVDNSNRELHGALLDAEILADVYLAMTGGQTSLSL
AAHGQEGNGDGNYVMPIKRLPADRPRTRVISASAADIEAHTARMAAIEKSCGKVPLWLAG
IGAE
NT seq
735 nt
NT seq
+upstream
nt +downstream
nt
atgagatacgtagttctggataccgaaaccaccggcatgccggtaaccgacggccaccgg
gtcatcgagatcggtggggtcgaggtgatcgggcgccgactgaccgggcgtcatttccac
gtctatctcaatccggatcgagagatcgacgaaggcgccatcgcggtacacggcatcacc
aatgatttcgtcgccgacaagccgcgcttcgccgagatcgccgacagtttcttcgagttc
atcgaaggcgccgagctcgtcatccacaacgcgcccttcgacgtgggcttcatcaacagc
gaattcgcgcgcctgggcgttcaccccgagcgtgccgacatcacccagcactgctcggta
ctcgataccctggtcatggcccgtgggcgccatcccgggcagcgcaatagcctggacgcc
ctgtgcaagcgttatggggtagataactccaaccgcgagctgcacggcgcactgctcgac
gccgagatcctcgcggacgtctatctggccatgactggtggccagaccagcctttcccta
gcggcccatggccaggaaggcaatggtgacggcaactatgtcatgccgatcaagcggctg
ccggccgatcgcccacgcacccgggtgattagtgcctctgctgcggatatcgaggctcat
accgcgcgtatggccgccatcgagaagagctgcggcaaggttccgctctggctggcgggc
attggtgccgaataa
DBGET
integrated database retrieval system
