Pseudomonas oryzihabitans PRS08-11306: BJP27_02380
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Entry
BJP27_02380 CDS
T05074
Name
(GenBank) porin
KO
K18093
imipenem/basic amino acid-specific outer membrane pore [EC:3.4.21.-]
Organism
ppsl
Pseudomonas oryzihabitans PRS08-11306
Pathway
ppsl01501
beta-Lactam resistance
ppsl02020
Two-component system
Module
ppsl_M00745
Imipenem resistance, repression of porin OprD
Brite
KEGG Orthology (KO) [BR:
ppsl00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
BJP27_02380
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
BJP27_02380
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
ppsl02000
]
BJP27_02380
01504 Antimicrobial resistance genes [BR:
ppsl01504
]
BJP27_02380
Transporters [BR:
ppsl02000
]
Other transporters
Pores ion channels [TC:
1
]
BJP27_02380
Antimicrobial resistance genes [BR:
ppsl01504
]
Gene sets
beta-Lactam resistance modules
Imipenem resistance, repression of porin OprD [MD:
M00745
]
BJP27_02380
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OprD
Motif
Other DBs
NCBI-ProteinID:
APQ14379
LinkDB
All DBs
Position
complement(534883..536160)
Genome browser
AA seq
425 aa
AA seq
DB search
MALGVVGGCTLLSVSGSALAEGFVDDSKLTLTARNYYFNSDRGNRRLNQVDWTQGFLMDY
QSGFTQGTVGFGVDAFGYLGIKLDGGPGRRGTGNLPVHAGNEPADEYSRAGAAVKARLGK
TVVRYGQQAPSSPVFAISTSRLFPQTATGWSVLSTDVTDLFMEAGHFTSSTDQVSTNRDG
DLWAGYAKRRADRIDFAGGKYSPVKGVSLSLYAAQLDDIWNQYYGNLNLVKALSSTQALT
FDANLYRTLDTGAAKAGSIDNTSYSLAAAYTQGPQTFTLGWQRIDGNTPFDYVGMGDNDR
LGAGILLANAVMISDFNAPGERSWQARYDLNFKTLGVPGLSLMTRYIKGTDIDGTGLPAS
SAYRGVYGADDREHELDLEGRYVLQSGAAKGLSIRVRQAWHRGSLSTGGSIDQLRLIVDY
PLRLL
NT seq
1278 nt
NT seq
+upstream
nt +downstream
nt
ttggcgctgggagtggtaggaggctgtacgctactgtcggtcagcggatcggccctcgcc
gaaggcttcgtcgacgacagcaaactcacgctgacggcgcgtaactattattttaacagt
gaccgtggcaaccgccgattgaatcaggtggattggacccagggcttcctgatggattat
cagtcgggattcacccagggcaccgtagggttcggggtcgatgccttcggttatctcggg
atcaagctagacggtggtccgggacgtcgtgggacgggtaacctgcccgtccatgccggc
aatgagccggcggacgaatactcccgcgccggtgcggcggttaaggcacgcctaggcaag
acggtggttcgctatggtcagcaggcgccctcgtcgccggtcttcgccatcagtaccagc
cgcctgtttcctcagacggccaccggttggagtgtgctgagtaccgacgtgaccgatctg
ttcatggaagccgggcatttcacctcttccaccgatcaggtcagtaccaacagggacggt
gatctctgggccgggtacgcgaagcggcgcgccgaccgcatagatttcgccggcggcaag
tacagcccggtcaagggcgttagcctatcgctctatgcggcgcagttggatgacatctgg
aatcagtactacggcaacctgaatctggtgaaggcgctgtctagcacccaagcgctgact
ttcgacgcgaatctctatcgcacgctggatacgggagcggccaaggctggctccatcgac
aacacctcctatagcctggccgctgcctacactcagggcccccagacgtttaccttgggc
tggcagcggatcgatggaaatacgccgttcgactacgttggcatgggtgacaacgaccgt
ctcggtgccgggattctcctggctaacgccgtgatgatctctgacttcaatgcacccggc
gaacgctcctggcaggcgcgctatgacctcaacttcaagacactcggcgtgcccggtctc
agcttgatgacccgctacatcaagggtaccgatatcgatggcactggtcttccggccagc
agcgcctatcgcggggtctatggcgcagacgaccgtgagcatgaactcgacctcgagggt
cgctacgttctgcaatcgggcgctgccaaaggcctatcgatccgggtgcggcaggcttgg
caccgcggatcgctctccactggcggctcgatcgatcagttgcggctgatcgtggactat
ccgttgcggctgctttaa
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