Pseudomonas oryzihabitans PRS08-11306: BJP27_03220
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Entry
BJP27_03220 CDS
T05074
Name
(GenBank) LysR family transcriptional regulator
KO
K13928
LysR family transcriptional regulator, malonate utilization transcriptional regulator
Organism
ppsl
Pseudomonas oryzihabitans PRS08-11306
Brite
KEGG Orthology (KO) [BR:
ppsl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ppsl03000
]
BJP27_03220
Transcription factors [BR:
ppsl03000
]
Prokaryotic type
Helix-turn-helix
LysR family
BJP27_03220
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LysR_substrate
HTH_1
Motif
Other DBs
NCBI-ProteinID:
APQ10564
LinkDB
All DBs
Position
complement(717935..718843)
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AA seq
302 aa
AA seq
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MSDNDDLTLRKLEIFLAFMRSRNLARAAAELGTSHVSVHRAIHSLESALRCPLFKHEGRT
LTPLDGAFVLEARAERLMQDLAETVRLTRQAAGFSADRFRLGALYSLTVKTVPQLIMGLK
LRRSELNIDLVLGSNADLAEQLHDFKLDAMLVALDDTVVNADCESVELFSDDIFLAAPSD
SPFADQAEVDLRDLAGVPFVTLTQGFATFRDGRQVFAQAGFEPEVIMQVNDIFSLMSMVS
SGVGYALLPGRVEAVYQNRLKLLPLAPRYRLQQRIGAVFLRSRERDPNLLAFVAECRMYA
RS
NT seq
909 nt
NT seq
+upstream
nt +downstream
nt
atgtccgataacgatgacctcaccctgcgcaagctggagatctttttggccttcatgcgc
agccgcaacctggcgcgtgccgccgccgagctgggcaccagccatgtcagcgtgcaccgc
gccatccattcgctggagagcgccctgcgttgtccgctgttcaaacacgaggggcgcacc
ctgacgccgctggacggcgccttcgtgctggaggcgcgggccgagcgactcatgcaggac
ctggccgagacggtgcggctgacgcgccaggctgcaggcttttcggccgatcgctttcgc
ctgggcgcactctattcgctgacggtgaagaccgtgccccagctgatcatggggctcaag
ctcaggcgcagcgaactcaacatcgacctggtgctgggctccaacgccgacctcgccgag
caactgcacgacttcaagctggacgccatgctggtggccctggacgacaccgtggtaaac
gccgactgcgagagcgtcgagctgttcagcgacgacatcttcctcgccgcgcccagcgat
tcacccttcgccgaccaggccgaggtggacctgcgcgacctggccggggtgcccttcgtc
accctgacccagggcttcgccacctttcgcgacggccgccaggtgttcgcccaggccggc
ttcgagccggaggtgatcatgcaggtcaacgacatcttctcgctgatgagcatggtcagc
tccggggtgggctatgcactgctacccgggcgggtcgaggcggtctatcagaaccgcctc
aagctgctgccgctggcgccgcgctaccgtctgcagcagcgcatcggcgcggtgttcctg
cgtagccgcgagcgcgatcccaacctgctggccttcgtcgccgagtgccggatgtacgcg
cgcagctag
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