Pseudomonas oryzihabitans PRS08-11306: BJP27_03240
Help
Entry
BJP27_03240 CDS
T05074
Name
(GenBank) LysR family transcriptional regulator
KO
K17737
LysR family transcriptional regulator, carnitine catabolism transcriptional activator
Organism
ppsl
Pseudomonas oryzihabitans PRS08-11306
Brite
KEGG Orthology (KO) [BR:
ppsl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ppsl03000
]
BJP27_03240
Transcription factors [BR:
ppsl03000
]
Prokaryotic type
Helix-turn-helix
LysR family
BJP27_03240
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LysR_substrate
HTH_1
PBP_like
HTH_30
Motif
Other DBs
NCBI-ProteinID:
APQ10567
LinkDB
All DBs
Position
complement(722302..723183)
Genome browser
AA seq
293 aa
AA seq
DB search
MKNLLQHVQAFLAVARQGSFARAAEELHLSPPALTVQIQQLEAWLEVQLLERNPRRVQLT
TAGEELRGPLERILLDLGDVQTHARDLAGLRRGRVTLAALPSFFMGPFPELLKTFQARHP
AIEIRLQDVVAGRVEALVREGQVDLGIGVRPRAVGLDFQPLYVDHLHLFVPRDHPWADRA
EITLAELDAVPLLLTGRDSSVRECLDFAFAAAGLRLVAALEANYMSTLLALVAAGQGLAL
LPESAGGEAPVVALPVRGESLARPLGILTPTGRSLTPAAQAFVELLRERLQVL
NT seq
882 nt
NT seq
+upstream
nt +downstream
nt
atgaagaatctgctccagcatgtgcaggcctttctcgccgtggcccgccagggctccttc
gctcgggcggcggaagagttgcacctgtcacccccggcgctcaccgtgcagatccagcaa
ctcgaagcctggctggaagtacagctgctggagcgcaatccgcgccgggtccagctcacc
accgccggtgaagagctacgcggcccgctggagcgcatcctgctggacctgggcgatgtc
cagacccacgcccgcgacctggccggcctgcgccgtgggcgggtcaccctggcggccttg
ccgtcgtttttcatgggcccctttcccgagttgctcaagaccttccaggcccgccatccg
gccatcgagatccgcctgcaggacgtggtggccgggcgggtcgaggcgttggtcagggaa
gggcaggtggacctgggcattggcgtccgcccgcgggccgtgggcctggatttccagccg
ctctacgtcgatcacctgcatctcttcgtgccccgcgaccatccttgggcggaccgtgcg
gaaatcaccctggccgaactcgacgccgtgcccttgctgctgaccggccgcgacagcagc
gtgcgcgagtgcctggacttcgccttcgccgccgccggtctacgtctggtggcggcgctg
gaggccaactacatgagcaccttgctggcgctggtggcggctgggcagggcctggccctg
ctgccggaatcggccggtggcgaggccccggtggtggccctgccggtccgcggcgagagc
ctggcccggccgctgggcatcctgacccccaccgggcgcagcctcaccccggcggcccag
gcctttgtcgagttgctcagggagcggctgcaggtgctctag
DBGET
integrated database retrieval system
