Pseudomonas oryzihabitans PRS08-11306: BJP27_03545
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Entry
BJP27_03545 CDS
T05074
Name
(GenBank) ABC transporter substrate-binding protein
KO
K02055
putative spermidine/putrescine transport system substrate-binding protein
Organism
ppsl
Pseudomonas oryzihabitans PRS08-11306
Pathway
ppsl02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
ppsl00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
BJP27_03545
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
ppsl02000
]
BJP27_03545
Transporters [BR:
ppsl02000
]
ABC transporters, prokaryotic type
Mineral and organic ion transporters
Putative spermidine/putrescine transporter
BJP27_03545
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SBP_bac_6
SBP_bac_8
SBP_bac_11
SBP_bac_1
ARM_KNTC1_3rd
Motif
Other DBs
NCBI-ProteinID:
APQ10622
LinkDB
All DBs
Position
795242..796258
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AA seq
338 aa
AA seq
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MKSRFPLRHLLAGLALACGLASAQAAEETAICYNCPLEWADWGEQLKAIAADTGIHVPQD
NKNSGQALAQLVAERDAPVADVVYYGVTFGIQAEKAGVLAPYQPKHWDQVPTGLKDPKGE
WTAIHSGTLGFMVNTQALGGKPVPQSWADLLKPEYRGLVGYLDPSSAFVGYVTAVAVNQA
MGGDLDNFGPALSFFKKLAANDPIVPKQTAYARVLSGEIPILVDYDFNAYRARYKDGAPV
AFVIPQEGSLTVPYTMSLVKGAPHRANGEKVLDFVLSDKGQELWAKAYLRPVRDVPLPAE
VKSRFLPAADYARAHTVDYGHMAAVQEAFAKRYQAEVR
NT seq
1017 nt
NT seq
+upstream
nt +downstream
nt
atgaaatcccgcttcccgttacgtcatctcctggccggtctggccctggcctgtggtctg
gccagcgcccaggccgccgaagaaaccgccatctgctacaactgcccgctggagtgggcc
gattggggtgaacagctcaaggccatcgccgccgataccggcatccacgtcccccaggac
aacaagaactccggccaggccctggcccagctggtcgccgagcgcgacgcgccggtggcc
gacgtcgtctactacggggtgaccttcggcatccaggcggaaaaagctggggtactggcc
ccctaccagcccaagcactgggaccaggtgcccaccggcctgaaggaccccaagggtgag
tggaccgccatccactccggcaccctcggcttcatggtcaacacccaggccctgggcggc
aagccggtcccgcagagctgggccgatctgctcaagcccgagtaccgcggcctggtgggt
tacctggacccgtccagcgccttcgtcggctacgtgacggcggtggcggtcaaccaggcc
atgggcggcgatctcgacaatttcggcccagcgctgagtttcttcaagaagctggccgcc
aacgaccccatcgtgcccaagcagaccgcctatgcgcgagtgctctcgggtgagatcccg
atcctggtcgactacgacttcaacgcctatcgcgcccgctacaaggacggcgccccggtg
gccttcgtgatcccccaggaaggcagcctgacggtgccctacaccatgagcctggtgaag
ggtgcgccgcaccgcgccaatggcgagaaggtgctggacttcgtgctgtcggacaagggc
caggaactctgggccaaggcctatctgcgcccggtgcgcgacgtgccgctgcccgccgag
gtgaagtcgcgcttcctgccggccgccgactatgcccgcgcccacacggtggactacggc
cacatggcggcggtccaggaagccttcgccaagcgctatcaggccgaggtgcgctga
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