Pseudomonas oryzihabitans PRS08-11306: BJP27_04020
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Entry
BJP27_04020 CDS
T05074
Name
(GenBank) formate dehydrogenase subunit alpha
KO
K00123
formate dehydrogenase major subunit [EC:
1.17.1.9
]
Organism
ppsl
Pseudomonas oryzihabitans PRS08-11306
Pathway
ppsl00630
Glyoxylate and dicarboxylate metabolism
ppsl00680
Methane metabolism
ppsl01100
Metabolic pathways
ppsl01120
Microbial metabolism in diverse environments
ppsl01200
Carbon metabolism
Brite
KEGG Orthology (KO) [BR:
ppsl00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
BJP27_04020
09102 Energy metabolism
00680 Methane metabolism
BJP27_04020
Enzymes [BR:
ppsl01000
]
1. Oxidoreductases
1.17 Acting on CH or CH2 groups
1.17.1 With NAD+ or NADP+ as acceptor
1.17.1.9 formate dehydrogenase
BJP27_04020
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GFIT
Motif
Pfam:
Molybdopterin
Molydop_binding
Molybdop_Fe4S4
Fer2_4
NADH-G_4Fe-4S_3
Fer4
Fer4_6
Fer4_7
Fer4_21
Fer4_10
Fer4_2
Fer4_9
Fer4_8
Fer4_18
Fer4_16
Fer4_15
Fer4_4
TPP_enzyme_M
Fer4_17
Motif
Other DBs
NCBI-ProteinID:
APQ10711
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All DBs
Position
904974..907958
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AA seq
994 aa
AA seq
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MPAVAQCTLFYDGRALEGPVDLPLVDFLAAHDIHLPHVCYHRALGALQTCDVCWVEVDGD
LVRGCTLRSQEGLRVGSQVDRATAARHEGMDRILAKHELYCTVCEHNTGDCTLHNTVADM
KLPIQRYAYQRKPYAKDHSNPFYTYDPDQCILCGRCVEACQNVEVNETLSIDFSQDHPRV
LWDGGERIEGSSCVSCGHCVTVCPCNALLEKTMQPDAGPFTAMPEALKRPLIDAIKTVER
TMGAPPITGISVMDMHWRQPEIRRTKTVCTYCGVGCSFEMWTRDRHILKVQPVVDAPVNG
ISTCIKGKFAWDFVNDPQRLTTPLIREGDRFREASWDEALELVARRLLEIRDRHGADSLG
FIGSSKASNEEAYLTQKIARLIIGTNSVDNSSRYCQNPATQGLFRTVGYGGDAGTLADLE
QADLVILVGSNLAENHPVFASKLKAAQKHRGQRLLVVDPRRHEMAERAELFLRIRPGTDL
VWASAMARYQFDHGLADEAFLAQRVTGVADYRRSLAPFTLEFAEQVTGIARDQLVEAAEL
IGRAGAVCLCWAMGITQHSHGADTSTALSNLLLVTGNYGRPGTGGYPMRGHNNVQGASDF
GCLKNQYPGYEKVTDPAARAKWAKAWGVAPERLSDQVGQDNFLMVQDAAEHKVRAMYVIG
EETAFSDADSHNVHAAFTRLDFLVVQDIFLSRTAEFADVVLPGCPSVEKDGTFVNTERRI
QRFYEVLPPLGDCRPDWRILTDLAARMGHDWGYSHPSQIMAEVAGIADLFAGVSYERLEG
WNSQLWPVAASGASTPLLYTDRFHTEDGRARLYPVDWQPPAEDVDAEYDLLLDNGRMLEH
FQSMNQTDKGRRVTELSPHWFVEISPTLAQERGLEEGSWVRLSSRRGQVEVPVVITDRVA
GKVLFMPIHQGKPGLNALTGEHHDPDVNTPAYKETAVRLERLGRAPLPQPLPQENFRHGR
RTPLEGVPAQLVEVKWARDDYAPPLQPAPHPERF
NT seq
2985 nt
NT seq
+upstream
nt +downstream
nt
atgcccgcagttgcccaatgcaccctcttctacgatggccgcgccctcgaaggccccgtc
gacctgcccctggtggattttctcgccgcccacgacatccacctgccccacgtctgctat
caccgcgccttgggcgcactgcagacctgcgatgtctgctgggtggaggtggacggcgac
ctggtacgcggctgcaccctgcgcagccaggagggcctgcgcgtcggtagccaggtcgac
cgcgcgacggcggctcgccacgaaggcatggaccgcatcctcgccaagcacgagctgtat
tgcacggtctgcgagcacaacaccggggactgcacgctgcacaacaccgtggccgacatg
aagctgcccatccagcgctacgcctaccagcgcaaaccctacgccaaggatcattccaac
cccttctacacctacgatccggatcagtgcattctctgtggccgctgcgtcgaggcctgc
cagaacgtcgaggtcaacgagaccctgagcatcgacttcagtcaggaccatccgcgcgta
ctctgggacggcggcgagcgcatcgagggctccagttgcgtgagctgtggccactgcgtc
acggtctgtccgtgcaatgcgctgctggaaaagaccatgcagcccgatgccggccctttc
accgccatgccggaagcgctgaagcggccgctgatcgacgccatcaagacggtcgagcgg
accatgggtgcgccgcccatcaccggcatctcggtgatggacatgcattggcgccaaccg
gagatccggcgcaccaagacggtctgcacctactgcggagtgggctgcagcttcgaaatg
tggacccgtgaccgccacatcctcaaggttcagccggtggtggacgcgcccgtcaatggc
atctccacctgcatcaagggcaagttcgcctgggacttcgtcaacgatccgcaacgcttg
accacgccattgatccgtgagggcgaccgctttcgcgaagccagctgggacgaagccctg
gagctagtggcgcggcgactgctggagattcgcgatcgccacggagcggacagtctaggc
ttcatcggctcgagcaaagccagcaacgaagaggcctacctcacgcagaagatcgcccgg
ctgatcataggtaccaacagcgtcgacaattcttcacgctactgccagaacccggccacc
cagggactgttccgtaccgtaggctacggcggcgatgccggcaccctggccgacctggaa
caggccgacctggtgattctggtggggagcaacctggccgagaaccatcccgtgttcgcg
tccaagctcaaggctgcgcaaaagcatcgtggtcagcggctgttggtggtggatccgcgc
cgccatgaaatggccgaacgggccgagctattcctgcggatcagaccgggcaccgacctg
gtctgggcctcggccatggcgcgctaccagttcgatcacggcctggcggacgaagccttc
ctcgcccagcgcgtcacgggggtcgcagactatcgtcgctccctggcgcccttcaccctg
gaattcgccgagcaggtgaccggcattgcccgcgatcagctggtggaggccgccgaactc
atcggccgcgctggcgccgtctgcctgtgctgggccatgggcatcacccagcacagccat
ggcgcggataccagcaccgccctttccaacctgctcctggtgaccggcaactatggccga
cccggcaccggtggctatcccatgcgcggccataacaacgtgcagggcgcaagcgacttc
ggctgtctgaagaatcaatatccgggctacgaaaaggtcacggatccggcagcacgggcc
aaatgggccaaggcctggggcgtcgcgccggagcgcctgtccgaccaggtcggccaggac
aacttcctgatggtgcaggacgccgccgagcacaaggtgcgggcgatgtatgtgatcggc
gaggaaaccgccttttccgatgccgacagtcacaatgtccacgccgccttcacccgcctc
gatttcctggtggtccaggacatcttcctgagtcgcaccgccgagttcgccgacgtggtg
ttgccgggctgtccgagcgtggaaaaggacggcaccttcgtcaacaccgaacggcggatc
cagcgcttctacgaggtgctcccgccgcttggcgactgccggcccgactggcgcatcctg
accgatctggcggcccgcatgggccacgactggggttacagccatcccagccagatcatg
gccgaggtggccggcatcgccgacctcttcgccggggtcagctatgagcgcctcgagggc
tggaattctcagctctggccagtcgcggccagcggggcgagcacgccgctgctctacacc
gaccgctttcataccgaggacgggcgcgccaggctctatccggtggactggcagccgccg
gccgaagacgtggacgccgagtacgacctgctcctcgacaacggtcggatgctcgaacac
ttccagagcatgaaccagaccgacaagggccggcgggtgaccgagctttctccccactgg
ttcgtcgagatcagtccgacgcttgcccaggagcgggggctggaagaaggcagctgggtg
cgcctgagctccagacgcggccaggtggaggtgcccgtggtgatcaccgaccgggtcgcc
ggcaaggtgctgttcatgcccatccaccagggcaagccggggctcaacgccctgaccggc
gaacatcacgatcccgacgtcaacacccctgcctacaaggaaaccgcggtgcgcctggag
cgcctcggccgggcgccgctgccgcagccgttgccgcaagaaaacttccgccacggccgg
cgtacgcccctggagggcgtcccggcacaactcgtcgaggtgaagtgggcccgggacgac
tatgccccacccctgcagcccgccccccatccggagcgcttctga
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