Pseudomonas oryzihabitans PRS08-11306: BJP27_05945
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Entry
BJP27_05945 CDS
T05074
Name
(GenBank) type III effector Hop protein
Organism
ppsl
Pseudomonas oryzihabitans PRS08-11306
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Plasmid_RAQPRD
Motif
Other DBs
NCBI-ProteinID:
APQ14426
LinkDB
All DBs
Position
1354599..1354934
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AA seq
111 aa
AA seq
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MSSYPRKPFGHFGLAVVLGLLASQAQAAGTASEQANVDVMIRQLNAVEAVARRSAELPSD
GSYRYRLDYSRLAADLARIRQGLQDYLAPSRAQPRDVTELSGQYQRERAQP
NT seq
336 nt
NT seq
+upstream
nt +downstream
nt
ctgtcctcctaccctcgtaagccattcggtcatttcggtcttgccgtggtgcttgggctc
ctggcgagccaggcccaggccgccggcactgcctccgagcaggccaacgtcgacgtcatg
atccgccagctcaacgccgtcgaggcggtggcccggcgcagcgccgagctacctagcgat
ggcagctaccgctaccggctggactacagccgcctcgccgctgacctcgcccggatccgc
cagggcctgcaggactacctggcgcccagccgtgcccagccacgcgacgtgacagagctt
tccggtcagtaccagcgtgaaagggcccagccatga
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