Pseudomonas oryzihabitans PRS08-11306: BJP27_06325
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Entry
BJP27_06325 CDS
T05074
Symbol
fliA
Name
(GenBank) RNA polymerase sigma factor FliA
KO
K02405
RNA polymerase sigma factor FliA
Organism
ppsl
Pseudomonas oryzihabitans PRS08-11306
Pathway
ppsl02020
Two-component system
ppsl02025
Biofilm formation - Pseudomonas aeruginosa
ppsl02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
ppsl00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
BJP27_06325 (fliA)
09140 Cellular Processes
09145 Cellular community - prokaryotes
02025 Biofilm formation - Pseudomonas aeruginosa
BJP27_06325 (fliA)
09142 Cell motility
02040 Flagellar assembly
BJP27_06325 (fliA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ppsl03021
]
BJP27_06325 (fliA)
09183 Protein families: signaling and cellular processes
02035 Bacterial motility proteins [BR:
ppsl02035
]
BJP27_06325 (fliA)
Transcription machinery [BR:
ppsl03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
BJP27_06325 (fliA)
Bacterial motility proteins [BR:
ppsl02035
]
Flagellar system
Flagellar assembly proteins
Stator
BJP27_06325 (fliA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r4
Sigma70_r3
Sigma70_r4_2
HTH_23
UPF0122
HTH_30
TY-Chap3
GerE
Motif
Other DBs
NCBI-ProteinID:
APQ11129
LinkDB
All DBs
Position
complement(1420238..1420954)
Genome browser
AA seq
238 aa
AA seq
DB search
MYSRTSERTQQEQLINRYAPLVKRIAYHLLARLPASVQVEDLMQAGMIGLLEASRKYDSG
KGASFETYAGIRIRGAMLDEVRKGDWAPRSVHRNTRMVTDAIRAVEARTGRDAKDSEVAA
ELKLSLDEYYGILGDTMGSRLFSFDDLMEGGEHGLEESGSHELEPGRGLEDERFRKALAD
AIANLPERERLVLSLYYDEELNLKEIGEVLGVSESRVCQLHSQCAARLRARLADWRSR
NT seq
717 nt
NT seq
+upstream
nt +downstream
nt
atgtacagcagaacttcggaacgtacccagcaggagcaactcatcaaccgctacgcgccg
ttggtgaagcgtatcgcctaccacctgttggcgcgcctgccggccagcgtccaggtcgag
gacctgatgcaggccggcatgatcggcctgctggaggcctcgcgtaaatacgattccggc
aagggcgcgagcttcgagacctacgccggtatccgtattcgcggggccatgctcgacgag
gtccgcaagggcgactgggcgccacgctcggtccatcgcaacacgcgcatggtcaccgac
gccattcgggcggtggaagcgcgcactggtcgcgacgctaaagattccgaagtcgctgcc
gaacttaaattgagtctggatgagtactacggcatccttggcgacaccatgggaagtcgc
ctattcagtttcgacgaccttatggaggggggtgagcatgggctcgaggagagcggttcg
catgaactcgagcccggtcgcggcctggaagacgagcgcttccgcaaggctctggccgac
gccatcgccaatcttccggagcgtgaacgcctggtgctctcgctgtattacgacgaggaa
cttaacctcaaggaaatcggcgaggtgttgggagtgagcgaatcccgggtctgccagctc
cacagtcaatgcgcggcgcgcctgcgggctcggctggcggattggcgttcacgttaa
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