Pseudomonas oryzihabitans PRS08-11306: BJP27_06615
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Entry
BJP27_06615 CDS
T05074
Name
(GenBank) sigma-54-dependent Fis family transcriptional regulator
KO
K10941
sigma-54 dependent transcriptional regulator, flagellar regulatory protein
Organism
ppsl
Pseudomonas oryzihabitans PRS08-11306
Pathway
ppsl02020
Two-component system
ppsl02025
Biofilm formation - Pseudomonas aeruginosa
ppsl02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
ppsl00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
BJP27_06615
09140 Cellular Processes
09145 Cellular community - prokaryotes
02025 Biofilm formation - Pseudomonas aeruginosa
BJP27_06615
09142 Cell motility
02040 Flagellar assembly
BJP27_06615
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ppsl03000
]
BJP27_06615
09183 Protein families: signaling and cellular processes
02035 Bacterial motility proteins [BR:
ppsl02035
]
BJP27_06615
Transcription factors [BR:
ppsl03000
]
Prokaryotic type
Helix-turn-helix
Other families
BJP27_06615
Bacterial motility proteins [BR:
ppsl02035
]
Flagellar system
Flagellar assembly proteins
Others
BJP27_06615
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Sigma54_activat
FleQ
AAA_lid_14
Sigma54_activ_2
HTH_8
AAA_5
HTH_50
AAA_16
nSTAND3
AAA_7
AAA
bpMoxR
HTH_30
Motif
Other DBs
NCBI-ProteinID:
APQ11181
LinkDB
All DBs
Position
complement(1482303..1483781)
Genome browser
AA seq
492 aa
AA seq
DB search
MWRETKILLIDDEAERRQAVSIILDFLGEAHLACTSSDWQSSLETLDSSRQVSCVLVGRV
DTRGNSVELLKQIVAWDEMVPLLLLGETAQPEWPDDVRRRVLVSLEYPLAYNKLLDSLHR
AQVYREMYDQARDRGRQREPELFRSLVGTSRAIQGVRKMMQQVADTEATVLILGESGTGK
EVVARNLHFHSKRREAPFVPVNCGAIPAELLESELFGHEKGAFTGAITSRAGRFELANTG
TLFLDEIGDMPLPMQVKLLRVLQERTYERVGSNKTQTVDVRIIAATHKNLEQMIAAGTFR
EDLYYRLNVFPIDMAPLRERAEDIPLLINELIARMEHEKRGSIRFNSAAIMSLCRHEWPG
NVRELANLVERMAIMHPYGVIGVAELPLKFRYVEDEADPMVESLREELQEREAMAGIGTL
EVSSSALLPSEGLDLKDYLANLEKSFIQQALDDAGGVVARAAERLRIRRTTLVEKMRKYG
MGRREDEFDEDI
NT seq
1479 nt
NT seq
+upstream
nt +downstream
nt
atgtggcgtgaaaccaagatccttctgatcgacgatgaagccgaacggcgccaggccgtt
tcgatcattctcgattttctcggcgaagctcatctcgcctgtaccagttccgattggcaa
tcctcactggaaaccctcgacagcagccggcaggtcagctgcgtgctggtggggcgcgtc
gatacccggggcaacagcgtcgaattgctcaagcaaatcgtggcttgggatgagatggtg
cccttgctactgttgggcgagacggcgcaaccggagtggccggacgatgtgcgccgccgg
gtgctggtctccctcgaatacccgctggcctacaacaagctgctcgattccctgcaccgg
gcccaggtctatcgcgagatgtacgaccaggcccgggatcgtggtcgacagcgtgagccg
gaattgttccgcagcctggtgggtaccagtcgtgccatccagggggtgcgcaagatgatg
cagcaggtggccgataccgaggccacggtgctcatcctcggcgagtccggcaccggcaag
gaggtggtagcgcgcaatctgcacttccactccaagcgccgcgaagcgcccttcgtgccg
gtcaactgcggcgccattccggcggagctgctggaaagcgagctgttcggccacgagaag
ggcgccttcaccggcgccatcaccagccgcgcgggtcgcttcgagctagctaacacaggc
accctgttcctcgacgagatcggtgacatgccgctacccatgcaggtcaagctgctacgg
gtgctgcaggagcggacctatgagcgggtgggcagcaacaagacccagaccgtggacgtg
cgcatcatcgcggcgacccacaagaacctggagcagatgatcgccgcgggcaccttccgc
gaagacctctattaccgcctcaacgtctttcccatcgacatggcgcccctgcgcgagcgt
gccgaggacatcccgctgctgatcaatgagctgatcgcgcggatggagcacgagaagcgt
ggctccattcgcttcaattcggcggccatcatgtcgctgtgccgccacgaatggccgggc
aacgtgcgcgaactggccaacctcgtcgagcgcatggcgatcatgcatccctacggggtg
atcggtgtggccgagctgccgctcaagttccgctacgtggaagacgaagccgatcccatg
gtggagtcgctgcgtgaggaattgcaggagcgcgaggccatggccgggatcggcaccctc
gaggtgtcttcctcggcgctgctgcccagcgagggcctggatctcaaggattacctggcc
aatctggaaaagagcttcatccagcaggcattggacgatgccggtggcgtggtcgcgcgc
gccgcggagcgcctgcgcatccgccggaccaccttggtcgagaagatgcgcaagtacggc
atgggtcgccgcgaggacgagttcgacgaggatatctga
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