Pseudomonas oryzihabitans PRS08-11306: BJP27_06840
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Entry
BJP27_06840 CDS
T05074
Name
(GenBank) DNA gyrase subunit A
KO
K02469
DNA gyrase subunit A [EC:
5.6.2.2
]
Organism
ppsl
Pseudomonas oryzihabitans PRS08-11306
Brite
KEGG Orthology (KO) [BR:
ppsl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
ppsl03032
]
BJP27_06840
03400 DNA repair and recombination proteins [BR:
ppsl03400
]
BJP27_06840
Enzymes [BR:
ppsl01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
BJP27_06840
DNA replication proteins [BR:
ppsl03032
]
Prokaryotic type
DNA Topoisomerases
BJP27_06840
DNA repair and recombination proteins [BR:
ppsl03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
BJP27_06840
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_topoisoIV
DNA_gyraseA_C
Motif
Other DBs
NCBI-ProteinID:
APQ11222
LinkDB
All DBs
Position
complement(1531568..1534402)
Genome browser
AA seq
944 aa
AA seq
DB search
MGELAKEILPVNIEDELRQSYLDYAMSVIVGRALPDVRDGLKPVHRRVLYAMSELGNDWN
KPYKKSARVVGDVIGKYHPHGDTAVYDTIVRMAQPFSLRYMLVDGQGNFGSVDGDNAAAM
RYTEVRMSKLAHELLADLDKETVDWVPNYDGTEQIPAVMPTRIPNLLVNGSSGIAVGMAT
NIPPHNLGEVIDGCLALIENSELTVDDLMQYIPGPDFPTAGIINGRAGIIEAYRTGRGRI
YVRARAEVEDIDKSANRQQIVITELPYQLNKARLIEKIAELVKEKKIEGITELRDESDKD
GMRVVIELRRGETPEVVLNNLYAQTQLQTVFGINVVALLDGQPRTLNLKELLEAFIRHRR
EVVTRRTVYELRKARERGHILEGQAVALSNIDPVIELIKTSPTPAEAKERLIATPWESSA
VREMVERAGADSCRPDDLPEQYGLHEGKYHLSPEQAQAILDLRLHRLTGLEHEKLIAEYQ
EILQQIGELIRILTNPERLMEVIREELEKVKAEFGDKRRTEIVASQVDLTIADLITEEDR
VVTISHGGYAKSQPLHAYQAQRRGGRGRSASAVKDEDYIEHLLVANSHTTLLLFSSLGKV
YWKRTYEIPEASRAARGRPLVNLLPLAEGERITAMLPVDLEAVRQQAPLGDEDLGEQDDN
LDIEDAVLVEDDVESEGEEGEVVDAGQDEPTGAYIFMATRNGTVKKTPLVQFSRPRSNGL
IALKLEEGDSLIAAAITDGAREVMLFSDGGKVIRFKERHVRTMGRTARGVRGMRLAEGQR
LISMLIPEPGAEILTASLNGFGKRTAMAEYPQRGRGGQGVIAMVINERNGPLIGAIQVLD
GEEIMLISDQGTLVRTPVEGISRTGRNTQGVTLIKLGKGEKLVGLERVQEPSVDEELLDH
EAELDGEVLDKELPVDSHEPDQDDVLPGASDVPSDDLPDEDDER
NT seq
2835 nt
NT seq
+upstream
nt +downstream
nt
atgggtgaactggccaaagaaatcctcccggtcaatatcgaagacgaactgcgacagtcg
tatctcgactacgcgatgagcgtcatcgtcggccgggccctgccggatgtacgcgacggt
ctcaagccggtgcaccggcgcgtgctctacgccatgagcgaactgggcaacgactggaac
aagccgtacaagaaatccgcccgtgtggtgggtgacgtcatcggtaaataccacccccac
ggcgacaccgccgtctacgacaccatcgtacggatggcgcagcctttctcgctgcgctac
atgctggtggacggccagggcaacttcggttcggtcgacggcgacaacgccgccgccatg
cgttacaccgaagtgcggatgtccaagctcgcccacgaactgctggccgacctggataaa
gagaccgttgattgggtgcccaactacgacggcaccgagcagatcccggcggtgatgccc
acgcgcatccccaacctgctggtcaacggctccagcggtatcgcggtcggcatggccacc
aacatcccgccgcacaacctgggcgaggtgatcgatggctgcctggcgctgatcgagaac
agcgagctgaccgtcgacgacctgatgcagtacatccccggtccggacttcccgaccgcg
ggcatcatcaacggtcgcgccggcatcatcgaggcctatcgcaccggtcgtggccgcatc
tatgtgcgggcccgcgccgaggtcgaggacatcgacaagagcgccaatcgccagcagatc
gtcatcactgagctgccctaccagctcaacaaggcgcggctgatcgagaagatcgccgag
ctggtgaaagagaagaagatcgaaggcatcaccgagctgcgcgacgagtccgacaaggac
ggcatgcgcgtggtcatcgagctgcgtcgcggcgagacccccgaggtggtgctcaacaac
ctctacgcccagacccagctgcagacggtgttcggcatcaacgtggtggccctgctcgac
ggccagccgcgcaccctgaatctcaaggagctgctggaagccttcattcgccatcgtcgc
gaagtcgtcacccggcgcaccgtctacgaactgcgcaaggcgcgcgagcgtggccacatc
ctcgaaggccaggcggtcgccctgtccaacatcgatccggtcatcgaactgatcaagacc
tcgccgaccccggccgaagccaaggaacgcctgatcgccacgccctgggaatccagcgcg
gtacgcgagatggtcgagcgcgccggggccgattcctgccgcccagacgacctgcctgag
caatacggcctgcacgagggcaagtatcacctctcgcccgagcaggcccaggccatcctc
gatctgcgtctgcaccgcctgaccggcctggagcacgagaagctcatcgccgagtaccag
gagatcctgcagcagatcggcgagctgatccgcatcctcaccaaccccgaacggctgatg
gaagtcatccgcgaggagctggagaaggtcaaggccgagttcggcgacaagcgtcgtacc
gagatcgtcgcctcccaggtggacctgaccatcgccgacctcatcaccgaggaagaccgc
gtcgtcaccatctcccatggcggctacgccaagtcccagccgctgcacgcctaccaggcg
cagcgccgtggcggtcgcggccgctcggcttcggcggtcaaggacgaggactacatcgaa
cacctgctggtcgccaacagccatacgaccctgctgctgttctccagcctgggcaaggtc
tactggaagcgtacctacgagatccccgaggcctcccgcgccgcccgtggccgtccgctg
gtcaacctgctaccgctggccgaaggcgagcgcatcaccgccatgctgccggtcgacctg
gaagccgtgcgccagcaggcgcccctcggtgacgaggacctgggcgagcaggacgacaac
ctggacatcgaagacgccgtgctggtggaagacgacgtcgagagcgaaggcgaggagggc
gaggtcgtcgatgccggccaggacgagcccaccggtgcctacatcttcatggcgacccgc
aacggtaccgtgaagaagaccccgctggtgcaattcagccgtccgcgcagcaacggcctg
atcgcgctgaagctggaagagggcgacagcctgatcgccgccgccatcaccgatggcgcc
cgcgaagtcatgctgttctccgacggcggcaaggtcatccgtttcaaggaacgtcacgtg
cgcaccatgggccgtaccgcccgcggcgtgcgcggcatgcgcctggccgaaggccagcgc
ctgatctccatgctgatccccgagccgggcgccgagatcctcaccgccagcctcaacggc
ttcggcaagcgcaccgccatggccgaatacccgcagcgtggtcgcggtggccagggcgtg
atcgccatggtcatcaacgagcgtaacggtcccctgatcggcgccatccaggtgctggac
ggcgaagagatcatgctgatctccgaccaaggcaccctggtgcgcaccccggtggaaggc
atctcccggaccggtcgtaacacccagggtgtcaccttgatcaagctcggcaagggcgag
aagctggtgggcctggagcgggtgcaggagccttcggtggacgaagagctgctggaccac
gaggccgaactggacggtgaggtgctcgacaaggaattgccggtcgacagccacgaaccg
gaccaggacgatgtgctacccggcgccagcgacgtgccgagcgatgaccttcccgacgag
gatgacgagcgatga
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