Pseudomonas oryzihabitans PRS08-11306: BJP27_08310
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Entry
BJP27_08310 CDS
T05074
Name
(GenBank) lytic murein transglycosylase
KO
K08309
peptidoglycan lytic transglycosylase [EC:
4.2.2.29
]
Organism
ppsl
Pseudomonas oryzihabitans PRS08-11306
Brite
KEGG Orthology (KO) [BR:
ppsl00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
ppsl01011
]
BJP27_08310
Enzymes [BR:
ppsl01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.29 peptidoglycan lytic transglycosylase
BJP27_08310
Peptidoglycan biosynthesis and degradation proteins [BR:
ppsl01011
]
Peptidoglycan biosynthesis and degradation
Lytic transglycosylase
BJP27_08310
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
SLT
SLT_L
Cucumo_coat
TPR_19
SidM_Rab1-act
Motif
Other DBs
NCBI-ProteinID:
APQ11509
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All DBs
Position
1845834..1847762
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AA seq
642 aa
AA seq
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MRGRLLCLLPLLLAPLIASTTSQAAPLEQQRQLYDQAKAALDKGDASVYLANRGELRTYP
LEPYLAYDELIKRVPGASDAEIETFLAEHGDLPQSNWLRLRWLRSLADRGDWTRFEKYYS
PDYNFTELDCLHGQYLIAQGNASEGFKLAEKLWLAGKPQPTTCDGLFQAWAARGQLTEER
VWERAKRAADKGEYGLVRALMPQLPTLASQAQRLIEVAQKPQLITNVQAFTPASESLADV
VGLGLRKLARQDPEQAMPLLEIYSQRMPFTRDEKVAIARQIGLTLAKNFDPRALPLMERY
DPELRDDDVSEWRARLLLRLGRWSDAHALIERFPPSLAKANRWEYWRARTLELMQPQSPT
ALHEYAEVSRERDYYGFLAADRSKAPYQLNNRPLMLSEALKRKVRNTPGVQRALEFIARG
EPINARREWFYVSRHFNRDELVAQARLAYDMQWYFPAIRTISLAKYWDDLDVRFPIAYRE
SFLREAQARGLHSSWVFAITRQESGFMADARSGVGAMGLMQLMPATASHTASKFAIPLAS
PQQALAPEKNIELGTAYLSMVNAQFNGNRVLASAAYNAGPGRVKRWLTGARHLAFDVWVE
TIPFDETRQYVQNVLAYAVIYGQKLNAPQPLVEWNERFFDET
NT seq
1929 nt
NT seq
+upstream
nt +downstream
nt
atgcgcggtcgcctgctctgtctcctgcccctgctcctcgctcccctgatcgcctccacc
acctcgcaggccgctcccctggagcagcagcggcaactctacgaccaggccaaggcggcg
ctggacaagggtgacgccagcgtctacctggccaatcgcggcgaattgcgcacctatccg
ctggagccctacctggcctacgacgagctgatcaagcgcgtccccggcgccagcgacgcc
gagatcgagacctttctcgccgagcacggcgacctgccgcaatccaactggctgcgcctg
cgctggctgcgcagcctggccgaccgcggcgactggacacgcttcgagaagtactattcg
cccgactacaacttcaccgaattggattgcctgcacggccagtacctgatcgcccagggc
aatgccagcgagggcttcaagctggcggaaaagctctggctggcgggcaagccccaaccg
accacctgcgatggtctgttccaggcctgggcggctcgggggcagctcaccgaggagcgg
gtgtgggaacgcgccaagcgggccgccgacaagggcgagtacggtctggtgcgcgccctg
atgccgcagttgcccaccctcgccagccaggcccagcgcctgatcgaggtggcgcagaag
ccgcagctgatcaccaatgtccaggccttcaccccggccagcgaaagcctcgccgacgtg
gtcggcctgggcctgcgcaagctggcgcgccaggacccggagcaggccatgcccttgctc
gagatctacagccagcgcatgcccttcacccgcgacgagaaagtcgccatcgcccggcag
atcggcctgaccctggcgaagaatttcgatccgcgcgccctgccgctgatggagcgctac
gaccccgaactgcgtgacgacgacgtcagcgaatggcgcgcccggttgctgctgcgcctg
ggtcgctggagcgatgcccatgcgctgatcgagcgctttccgccgagtctggccaaggcc
aaccgctgggaatactggcgtgcccgtaccctggagctgatgcagccgcaaagccccacg
gcgttgcacgaatacgccgaggtcagtcgcgagcgcgactactacggcttcctcgccgcc
gaccgcagcaaggcgccctaccagctcaacaaccggccgctgatgctgagcgaagcgctc
aagcgcaaggtacgcaacacccccggcgtgcagcgcgccctggaattcatcgcccgcggc
gagccgatcaatgcccgccgcgagtggttctacgtcagccggcatttcaatcgcgacgag
ttggtcgcccaggcgcgcctagcctatgacatgcagtggtacttcccggcgatccgcacc
atcagcctggccaagtactgggatgacctggacgtgcgcttccccatcgcctaccgcgaa
agcttcctgcgcgaagcccaggcccgcggcctgcacagcagctgggtgttcgccatcacc
cgacaggagagcggcttcatggccgatgcgcgctccggggtgggggccatgggcctgatg
cagctgatgccggccaccgccagccacaccgccagcaagttcgccattcccctggcttcg
ccgcaacaggcgctggccccggagaagaacatcgagctgggtaccgcctacctgtccatg
gtcaacgcccagttcaacggcaatcgggtactggcctcggcggcctataacgccggcccc
ggccgggtgaagcgctggctgaccggcgcgcgtcatctggccttcgatgtctgggtggag
accatccccttcgacgaaacgcggcaatacgtgcagaacgtgctggcctatgcggtgatc
tatggccagaagctcaatgcgccgcagccgctggtggagtggaacgagcgcttcttcgac
gagacctga
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