Pseudomonas oryzihabitans PRS08-11306: BJP27_08425
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Entry
BJP27_08425 CDS
T05074
Name
(GenBank) class II fumarate hydratase
KO
K01679
fumarate hydratase, class II [EC:
4.2.1.2
]
Organism
ppsl
Pseudomonas oryzihabitans PRS08-11306
Pathway
ppsl00020
Citrate cycle (TCA cycle)
ppsl00620
Pyruvate metabolism
ppsl00720
Other carbon fixation pathways
ppsl01100
Metabolic pathways
ppsl01110
Biosynthesis of secondary metabolites
ppsl01120
Microbial metabolism in diverse environments
ppsl01200
Carbon metabolism
Module
ppsl_M00009
Citrate cycle (TCA cycle, Krebs cycle)
ppsl_M00011
Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
ppsl_M00982
Methylcitrate cycle
Brite
KEGG Orthology (KO) [BR:
ppsl00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00020 Citrate cycle (TCA cycle)
BJP27_08425
00620 Pyruvate metabolism
BJP27_08425
09102 Energy metabolism
00720 Other carbon fixation pathways
BJP27_08425
Enzymes [BR:
ppsl01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.2 fumarate hydratase
BJP27_08425
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Lyase_1
FumaraseC_C
Motif
Other DBs
NCBI-ProteinID:
APQ11530
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All DBs
Position
1874707..1876101
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AA seq
464 aa
AA seq
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MSRTETDSIGPIEVADDVYWGAQTQRSLENFAIGNQQMPLAVVHALATVKKAAARVNLSL
GELPEDVATLIEKASSEILDGFHDDQFPLVVWQTGSGTQSNMNVNEVIAGRSNELAGNGK
GGKKPVHPNDHVNRGQSSNDCFPTAMHIATALAVQNDLLPAIAELSGGLALQSARYQNLV
KTGRTHMMDATPVTFGQELSAFVAQLDLAERAIRNALPAVMELAQGGTAVGTGLNAPKGF
DEAIAKEIAELTGLPFVTAPNKFAALAGHEPLVALHGGLKTLAVALMKIANDLRLLGSGP
RAGFAEVKLPANEPGSSIMPGKVNPTQCEALSMLACQVIGNDVTVGFAASQGHLQLNVYK
PVIAHNVLESIRLLADGCRNFNTHCVTGMEPDEHKMAEHLEQGLMLVTALNPHIGYDKAA
EIAKKAYAENKTLRAAALELGHLTDAQFDEWVRPETMLEAGGRG
NT seq
1395 nt
NT seq
+upstream
nt +downstream
nt
atgagccgtaccgaaaccgatagcatcggccccatcgaagtggccgacgacgtctactgg
ggcgcccagacccaaagatcgctggagaacttcgccatcggcaaccagcagatgccgctg
gcggtggtgcatgccctggccacggtgaagaaggcggccgcgcgggtgaacctctccctg
ggcgaactgccggaagacgtcgccaccctgatcgagaaggccagcagcgagatcctcgac
ggcttccacgacgaccagtttcccctggtggtctggcagaccggcagtggcacccagagc
aacatgaacgtcaacgaagtcatcgccgggcgcagcaacgagctggccggcaacggcaag
ggcggcaagaagccggtccaccccaacgaccacgtcaatcgcggccagagctccaacgac
tgcttccctaccgccatgcacatcgccaccgccctggcggtgcagaacgacctgctgccc
gccatcgccgaactatccggcggcctggcactgcaatcggcgcgttaccagaacctggtc
aaaaccggccgcacccatatgatggatgccaccccggtgaccttcggccaggagctgtcg
gccttcgtcgcccagctcgacctcgccgaacgcgccatccgcaatgccctgccggcggtc
atggaattggctcagggcggcaccgccgtgggtaccggtctgaacgcgcccaagggcttc
gacgaagccatcgccaaggaaatcgccgaactcaccggcctgcccttcgtcaccgcgccg
aacaaattcgccgccctcgccggccatgagccactggtggccctgcacggcggcctcaag
acgctggccgtagccctgatgaagatcgccaacgacctgcgcctgctgggctccggtccg
cgtgcgggcttcgccgaggtcaagctgccggccaacgaaccgggcagctccatcatgccg
ggcaaggtcaatccgacccagtgcgaggccttgtcgatgctggcctgccaggtgatcggc
aacgacgtcaccgtcggcttcgccgccagccagggccatctgcagctcaacgtctacaag
ccggtgatcgcccacaacgtgctggaatccatccgcctgttggccgatggctgccgcaac
ttcaacacccattgcgtcaccggcatggagccggacgagcacaagatggccgagcacctg
gaacaggggctgatgctggtgaccgcgctcaatccgcacatcggctacgacaaggccgcc
gagatcgccaagaaggcctatgccgagaacaagactctgcgcgccgccgcgctggaactc
ggccacctgaccgatgcccagttcgacgagtgggtacggccggaaaccatgctggaagcc
ggtggccgtggctga
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