Pseudomonas oryzihabitans PRS08-11306: BJP27_08880
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Entry
BJP27_08880 CDS
T05074
Symbol
murD
Name
(GenBank) UDP-N-acetylmuramoyl-L-alanine--D-glutamate ligase
KO
K01925
UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:
6.3.2.9
]
Organism
ppsl
Pseudomonas oryzihabitans PRS08-11306
Pathway
ppsl00470
D-Amino acid metabolism
ppsl00550
Peptidoglycan biosynthesis
ppsl01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
ppsl00001
]
09100 Metabolism
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
BJP27_08880 (murD)
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
BJP27_08880 (murD)
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
ppsl01011
]
BJP27_08880 (murD)
Enzymes [BR:
ppsl01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.9 UDP-N-acetylmuramoyl-L-alanine---D-glutamate ligase
BJP27_08880 (murD)
Peptidoglycan biosynthesis and degradation proteins [BR:
ppsl01011
]
Precursor biosynthesis
Amino acid ligase
BJP27_08880 (murD)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MurD-like_N
Mur_ligase_M
Mur_ligase_C
DNAPolymera_Pol
TrkA_N
Motif
Other DBs
NCBI-ProteinID:
APQ11611
LinkDB
All DBs
Position
complement(1972368..1973711)
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AA seq
447 aa
AA seq
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MLIASDQFRIVVGLGKSGMSLVRFLARRGVPFAVADTREQPPELATLRTQYPQVEVRCGE
LDADFLARAAELYVSPGLALETPALQEAAARGVRLSGDIDLFVRHAKAPIVAITGSNAKS
TVTTLVGDMALRAGKRVAVGGNLGTPALDLLADDVELYVLELSSFQLETCERLNAEVATV
LNVSEDHMDRYTDMPAYHQAKHRIFRGARQVVVNRDDPLSRPLIADGVPCLTFGLGRPDF
RVFGIREEEGRRYLALAFDNLLDVEELKIRGTHNHSNALAALALGQAAGLPLEPMLEALR
AFPGLEHRCQWVGEVAGVNYYNDSKATNVGAALAAVEGLGDDIAGQLVLIAGGDGKGADF
SALREPIARHCRAVVLLGRDAERIAEILPSTVQQVRVATLEDAVRESRALAQPGDAVLLS
PACASLDMFRNFEERGRLFAQAVGDLA
NT seq
1344 nt
NT seq
+upstream
nt +downstream
nt
gtgctcatcgcttccgaccagttccgtatcgtcgtcggcctcggcaagagtggcatgtcg
ctggtgcgcttcctcgcgcgccgcggcgtgccctttgccgtggccgatacgcgggaacag
ccgccggagcttgcgacgctgcggacccagtatccccaggtcgaggtgcgttgcggtgag
ctggatgccgacttcctcgcccgcgcggcggaactctacgtgagccccggtctggcgctg
gaaacgccggcgctgcaagaggccgcggcccgtggcgtacggttgtctggcgatatcgat
ctgttcgtccgccacgccaaggcgcccatcgtcgccatcaccggttccaatgccaagagc
accgtcaccactctggtcggcgacatggccctgcgcgccggcaagcgcgtggccgtgggc
ggcaatctcggtaccccggcgctggatctgctggccgatgacgtcgagctctatgtcctg
gagttgtcgagcttccagctggaaacctgcgagcgcctgaacgccgaggtggccacggtg
ctcaacgtcagcgaagaccacatggatcgctacaccgacatgccggcctatcaccaggcc
aagcaccgcatcttccgcggcgcccgccaggtggtggtcaatcgtgacgatccactgtcg
cggccgctgatcgccgatggcgtgccctgcctgaccttcggcctaggtcgtcccgatttc
cgtgtcttcggcattcgcgaggaggagggccgccgctatttggcgctggccttcgacaac
ctgttggatgtcgaggaattgaagatccgcggcacccacaaccacagcaatgccctggcc
gcgctggccctgggccaggctgccggcttgccgctggaacccatgctggaggccctgcgg
gccttccccggtctcgaacaccgctgccagtgggtaggcgaggtggcgggcgtcaactac
tacaacgattccaaggcgaccaatgtcggcgcggccctggccgccgtcgaaggcctgggc
gacgacatcgccggccaactggtgctgatcgccggtggcgacggcaagggcgccgacttc
agcgccctgcgcgagcccatcgcgcgtcactgccgcgccgtggtgttgctggggcgtgat
gccgagcggatcgccgagatcctgccgtcgaccgtgcaacaggtgcgcgtcgctaccctg
gaagacgccgtgcgcgagagccgcgccctggcccagccgggcgatgccgtgctgttgtcg
ccagcctgcgccagcctcgacatgttccgtaatttcgaagagcgcggacggctgttcgcc
caggccgtgggggacttggcatga
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