Pseudomonas oryzihabitans PRS08-11306: BJP27_09770
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Entry
BJP27_09770 CDS
T05074
Name
(GenBank) cryptochrome/photolyase family protein
KO
K06876
(6-4)DNA photolyase [EC:
4.1.99.13
]
Organism
ppsl
Pseudomonas oryzihabitans PRS08-11306
Brite
KEGG Orthology (KO) [BR:
ppsl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ppsl03400
]
BJP27_09770
Enzymes [BR:
ppsl01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.13 (6-4)DNA photolyase
BJP27_09770
DNA repair and recombination proteins [BR:
ppsl03400
]
Prokaryotic type
SSBR (single strand breaks repair)
Direct repair
BJP27_09770
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DPRP
Motif
Other DBs
NCBI-ProteinID:
APQ11775
LinkDB
All DBs
Position
complement(2173227..2174777)
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AA seq
516 aa
AA seq
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MNEGAVRRLLPVFGDQLSPELASLRAADPAQDVLLLAEVMSEASYVPHHPRKIAFIFSAM
RHFAVEMRERGFRVEYRTLDDPQNQGSLAAEIAFWARELNVAEVGVTETGEWRLEQTLRE
LELAVPLQWYGDDRFLCSRAAFARWAGSRTNLRMETFYRGMRRRHGWLMAGPEEPCGGTW
NLDKENRKALPRDHAVPAALSCPADACTREVLELVGRAFTHHYGRLEGFDYPVTRKDAER
LWQHFLDTGLHDFGAYQDAMARGEPYLHHARISAALNVGLLDLRHLCADLDTAYREGRVP
LNSAEGFLRQLIGWREYVRGIYWLRMPEYAELNALGNTRPLPEFYWTGETLMACMREAIG
QTLELAYAHHIQRLMVTGNFALLAGIVPQALGEWYLAVYLDAFEWVELPNTQAMVMHADG
GYLASKPYCASGQYIRRQSDYCKGCHYQVRESLGETACPFNALYWHFLIRHRRRFASYPR
MHPLYRNLDRQAPERQQALWQRGEELLARLDAGESL
NT seq
1551 nt
NT seq
+upstream
nt +downstream
nt
ttgaacgagggcgccgtccggcgcctgctgccggtctttggcgatcaactgagcccagaa
ctggcttccttgcgcgctgccgatccggcgcaagacgtgctgttgctggcggaggtcatg
agcgaggcctcctacgtgcctcatcatccgcgcaagatcgccttcatcttcagtgccatg
cgtcatttcgccgtcgagatgcgcgagcgtggctttcgggtcgagtaccgcaccctcgac
gatccccagaaccagggttcgctagctgccgagatcgccttttgggctcgcgaattgaac
gtagccgaggtgggtgtcaccgaaaccggcgaatggcgtctggagcagactctacgggag
ctcgagctggcggtgccgttgcagtggtacggcgatgatcgttttctctgcagccgagcg
gctttcgcccgttgggctggctcgcgcaccaacctgaggatggagaccttctaccgtggc
atgcgccggcgccatggctggctgatggcggggcccgaagagccctgtggcggcacctgg
aacctcgacaaggagaatcgcaaggcgctgcccagggaccatgccgttcccgccgcgctc
agttgccctgccgatgcctgcactcgcgaggtgctcgaactggtcggccgtgccttcacc
catcactatggccggctggagggcttcgattatccggtgacgcgcaaggacgccgagcgg
ctgtggcaacacttcctggacaccgggctgcacgatttcggcgcttaccaggacgccatg
gcccgtggcgagccttatctgcatcacgcccggatcagcgccgccctcaatgtcggcctg
ttggacctgcgccacctctgcgccgatctggataccgcctatcgcgagggcagggtgccg
ctgaacagtgccgaggggttcctgcgacagctcatcggctggcgcgagtacgttcgtggg
atctactggctacgcatgcccgaatacgccgaattgaatgccctgggcaatacgcgcccc
ttgccggagttctattggaccggtgagacactcatggcctgtatgcgtgaggccattggc
cagacactggagttggcctatgcccatcacatccagcgcttgatggtcaccggcaatttc
gccctgctggcgggtatcgtcccccaggccctcggcgagtggtatctggcggtatacctg
gatgccttcgagtgggtcgagctgcccaacacccaggccatggtcatgcatgcggacggt
ggctacctggcgagcaagccctattgtgccagtggccaatacatccggcggcaatccgac
tactgcaaaggttgccactatcaggtccgcgagtctctgggcgagacggcctgtcccttc
aatgccctctactggcacttcctgatccgccatcgccgccgtttcgccagttatccccgc
atgcatcctctctatcgaaatctggaccgccaggcgccggagcgacagcaggcgctgtgg
cagcggggcgaggaattgctggcgcgtctggatgccggagaatccctatga
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