Pseudomonas oryzihabitans PRS08-11306: BJP27_10265
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Entry
BJP27_10265 CDS
T05074
Name
(GenBank) DNA polymerase III subunit epsilon
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
ppsl
Pseudomonas oryzihabitans PRS08-11306
Pathway
ppsl03030
DNA replication
ppsl03430
Mismatch repair
ppsl03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
ppsl00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
BJP27_10265
03430 Mismatch repair
BJP27_10265
03440 Homologous recombination
BJP27_10265
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
ppsl03032
]
BJP27_10265
03400 DNA repair and recombination proteins [BR:
ppsl03400
]
BJP27_10265
Enzymes [BR:
ppsl01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
BJP27_10265
DNA replication proteins [BR:
ppsl03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
BJP27_10265
DNA repair and recombination proteins [BR:
ppsl03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
BJP27_10265
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
Motif
Other DBs
NCBI-ProteinID:
APQ14459
LinkDB
All DBs
Position
2289880..2290506
Genome browser
AA seq
208 aa
AA seq
DB search
MREQARRWVEQDVLVLDTEATGLGEDAQLIEVAVMTLGGRVLLDTLVRPAIAVPREATLI
HGLTDAHLVQAPTFPEVFARLWPLLQGRTVLAYGMAFDYRLLAHNAHLHGLALPPELERE
TPPVQLVDGTRLHCLMQLYAQFWQEPSLDSRSQDGWRRKSLAMAARNQGIPVQDTHRALP
DCRLKAALVQAVAGEAPATWNGLQALAG
NT seq
627 nt
NT seq
+upstream
nt +downstream
nt
gtgcgcgagcaggcccggcgctgggtggagcaggatgtcctggtgctcgacaccgaggcc
accggtcttggcgaagatgcccaactgatcgaggtggcggtgatgaccctgggcggccga
gtgctgctcgacaccctggtgcgacccgccatcgccgtcccgcgcgaagccaccctcatc
cacggcctgaccgatgcccacctggtccaggcgccgaccttccccgaggtcttcgcccgg
ctctggcccttgctgcaaggccgtaccgtgctggcctacggcatggccttcgactaccgc
ctgctggcgcacaacgcccatctgcacggcctggcgctgccgccggaactggaacgggag
acgccaccggtgcaactggtggacggcacccgcctgcactgcctgatgcagctctatgcc
cagttctggcaggaaccgagcctggacagccgcagccaggacggctggcggcgcaaatcc
ctggccatggccgcccgcaaccagggcatcccggtgcaggacacccaccgcgccctgccc
gactgccgcctcaaggctgcgctggtccaggccgtggcgggcgaggcgcccgccacctgg
aatgggctgcaggcgctggccggctag
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