Pseudomonas oryzihabitans PRS08-11306: BJP27_11050
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Entry
BJP27_11050 CDS
T05074
Name
(GenBank) hybrid sensor histidine kinase/response regulator
Organism
ppsl
Pseudomonas oryzihabitans PRS08-11306
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PAS
Response_reg
CHASE
PAS_9
PAS_4
PAS_3
HATPase_c
PAS_8
HisKA
Hpt
Diguanyl_cycl_sensor
PAS_10
Motif
Other DBs
NCBI-ProteinID:
APQ12013
LinkDB
All DBs
Position
complement(2455567..2460420)
Genome browser
AA seq
1617 aa
AA seq
DB search
MFKRLFSSSRLRWSLAVFLCGVLLTSLTTRHLAERNDRQVRSALRMASEDARTQILERLR
TYEYSLTGMRDVVLTAGDNLSREVITRYGLIHDLNQEFKGARGVGFIRRVPLAEEQRFVQ
EARADGYPNFTIRSFADHDGDRFVVQYIEPIGRNRRAVGMDAASEPSRREVVLLAMRSGA
VQLSAPLQLQASEHPEPGFLMVLPVYVGGHAPADVGLREEATQGWSYVPLGVQEMLGTLH
FNKPGLRVTLSDVTDPTQPRLFYHYHEDGGQGAAATAQPLPEITTEQDVYGRKWRLSFAA
TPVFVSALELTSLPLVHLFGKLFSLLAAGLTFALLTTRQRRRQYQQDQANLTAVVESSSD
GIISKDLNGVVLSWNHAAEQLFGYPASEAVGQRLLDLVVPTELEHEEWWVLDRIGKGEPV
PHFETRRQHRDGRYIDVLVSVSPMRGPDGRVVGASKTVRDISVQKAAQAEILALNARLEE
QVAQRTAELSQTNRLLGDVLRAASEVAIIATDREGRITLFNEGAERLLGYCADEVVGRWQ
ASDFHLPEELEAQGQALSAQYGAPVSGFRVLVERSERIGAEAREWTYVRRDGEHRDVSLV
VTTMRDGAGQIGGYLGIASDVTERKAAEQELAASLALTRAILDTAVNPIVTVDSAGLVRS
FNPAGERIFGYRAEEVVGQPIHRLIPGYLAGYEALFSCPLELPDNDTVQQGQEMEGRRRD
GSVFPITLSLGVTWTNGERLAVAIIADITEQSRQRQVLLQTRDQLTMAADVAELGIWCWQ
PDTGQLQCNERMFELYEWTDVQREQGLTYNDWRCRVHPDDLSGTEERLRAAIAGRAMFDP
VFRIRRQDGSLRHILAGAHTERDPRGRVLRVVGINRDITKQLELEHRLREERTRADLASQ
AKSSFLANMSHEIRTPMNAVLGMLQLLQRTALDSRQGDYLTKAQQAARSLLGLLNDVLDY
SKIEAGKLQLDVHPFSLEQVLRNLGVVLSGNSGEKNVEINYQLEAGLPTALIGDSLRLQQ
ILINLAGNALKFTEAGQVLVSVRRLSPADGPLRLEFAVQDTGIGISPDQQAQLFQGFTQA
EASISRRFGGTGLGLAICKRLVELMDGELQVESQLGVGSRFWFDVTLAVDSQGEAPLAPV
RRRVLLADDNTLIGHLLVETLAALGWQVDLVTSGAAALARIAQAQSQGQPYEAVLMDWRM
PDGDGLQSARQLRAQLSAKRPKVIMLTGFGRDFLSETQQSAEAPFDDYLIKPVTPAQIVE
AVERALGAEIPAGVHAAAAVDESHRLAGLRLLVVEDNALNRQVAAELLLAQGAQVELAEG
GLEGVERVLSGAPLDVVIMDMQMPDIDGLEATRRIRADGRFSTLPILAMTANASHTDRDA
CLAAGMDDHIGKPIDLELLVSRLQRLTGQEVTATTMVTSVGVERAVEPLSVVLRRFGGDA
RLFTSLLERFAEDSSQLLAALAQAWGADDNEGAVAVLHSLKGSAGTMGAQRLAARAADGE
RAGKAGAGIPADVAAELGTLRLLLDEALAELRSALAERLPPPPAQIAATLVVDWSARLDE
LALLLGQGNLEALDRLAELPEQCRAEAQVRYDLFRAQVETLDFAAALTTLPDLKEAL
NT seq
4854 nt
NT seq
+upstream
nt +downstream
nt
atgttcaagcggttgttctcgtcctcgcgcctgcgctggagcctagcggtcttcctgtgc
ggggttctgctgacaagtctgactactcgtcatctcgccgagcgtaacgaccgtcaggtt
cgcagcgccttgcgcatggcttccgaagatgcgcgcacccagatcctggagcgcctgcgc
acctacgagtacagcctgaccggtatgcgcgacgtggtgctcacggcgggtgacaatctc
tcccgcgaggtgatcacccgctacggactcatccacgacctgaatcaggagttcaagggg
gcccgcggcgtgggtttcattcgccgggtaccgctggcggaagaacagcgcttcgtgcaa
gaggcgcgcgccgatggctatccgaacttcaccatccgcagcttcgccgatcacgacggt
gatcgcttcgtggtgcaatacatcgagccgatcggccgcaatcggcgcgcggtgggaatg
gatgccgcgtccgagccgagtcgccgtgaggtcgtgttgctggccatgcgcagcggtgcc
gtgcagctcagcgcgcccctgcaactgcaggcctctgagcatcccgagccgggtttcctg
atggtgttgccggtctatgtgggtggccatgcgcccgcggatgtggggctgcgcgaggag
gccacccagggctggtcctatgtgccactgggcgtgcaggagatgctcggcaccctgcat
ttcaataaaccagggctacgggtgacgctgagcgacgtcaccgatccgacccagccgcgg
ctgttctaccactaccatgaggacggtgggcagggcgcggcggcgaccgcccagccgctg
ccggaaatcactaccgaacaggatgtctatgggcgtaagtggcgcctgagtttcgccgcc
accccagtgttcgtcagcgccctcgaactgacttcgctgccgctggtgcatctgttcggc
aagctgttcagcctgctggccgccggcctgaccttcgccctgctgaccactcgccagcgc
cgccgccagtaccagcaggaccaggccaacctcactgcggtggtggagagctcctccgac
ggcatcatcagcaaggacctcaacggcgtggtgctgagctggaaccacgcggcggaacag
ctgttcggctatcccgccagcgaagccgtggggcagcgcctgctcgatctcgtcgtgccc
accgagctggagcatgaagagtggtgggtactcgaccggattggcaagggggagccggtg
ccgcacttcgagacccggcgccagcatcgcgacgggcgctacatcgatgtcctggtcagc
gtctcgccgatgcgtgggcccgacggccgggtggtcggcgcgtccaagacggtgcgcgac
atctccgtgcagaaggccgcccaggccgagatcctggcgctcaatgcgcgtctcgaagag
caggtggcccagcgtaccgccgaactcagccagaccaaccggctgctcggtgacgtgctg
cgcgcggcctccgaggtagccatcatcgccaccgaccgcgaggggcgcatcaccctgttc
aacgagggcgccgagcgcctgctgggctattgcgccgacgaggtggtgggccgctggcag
gccagcgacttccacctgcccgaggagctggaggcccagggccaggccctgagcgcccag
tatggcgcgccggtcagcggcttccgcgtgttggtcgagcgctccgagcgcatcggcgcc
gaggcgcgcgagtggacctatgtccggcgcgacggcgagcaccgtgacgtcagcctggtg
gtgaccaccatgcgtgacggcgctgggcaaatcggcggttacctcggtatcgcctcggac
gtcaccgagcgcaaggccgccgagcaggagctggccgccagtctggcgctgacccgggcg
atcctggacaccgcggtcaaccccatcgtcaccgtcgacagcgccggcctggtgcgctcc
ttcaacccggccggcgagcgcatcttcggctatcgcgccgaggaggtggtcggccagccc
atccaccgcctgatccccggctatctcgccggttacgaggcgttgttcagttgtccgctg
gagctgcccgacaacgataccgtccagcaggggcaggaaatggaagggcgccgccgtgac
ggcagcgtcttccccatcaccctgagcctgggcgtgacctggaccaacggcgagcgcctg
gcggtcgccatcatcgccgacatcaccgagcagagtcgccagcgccaggtgctgctgcaa
acccgcgaccaactgaccatggccgccgatgtcgccgagctgggcatctggtgctggcaa
cccgacaccggccagttgcagtgcaacgagcgaatgttcgaactctacgaatggaccgac
gtccagcgcgagcagggcctgacctacaacgactggcgttgccgcgtgcatcccgacgat
ctgtccggtaccgaggaacgcctccgcgcggccatcgccgggcgcgcgatgttcgacccg
gtgttccgcatccgtcgccaggacggctcgctgcggcacatcctcgctggcgcccacacc
gagcgcgatccgcgtggccgggtgctacgggtggtgggcatcaaccgcgacatcactaaa
cagctggagctggaacatcgcctgcgcgaggaacgcacccgcgccgacctggccagccag
gccaagtcctccttcctggccaacatgagccacgagatccgcacgccgatgaacgccgtg
ctgggcatgctgcaattgctgcagcgcaccgccctggatagccgccagggcgactacctg
accaaggcccagcaggcggcgcgttcgctgctgggactgctcaacgacgtactggactat
tccaagatcgaagccggcaagctgcaactggatgtccatcccttcagcctggagcaggtg
ctgcgcaacctgggcgtggtgctctccggcaacagcggtgagaagaacgtcgagatcaac
taccagctcgaagcggggctacccaccgcgctgatcggcgacagcctgcgcctgcagcag
atcctcatcaacctggccggcaacgccctgaagttcaccgaggcgggccaggtgctggtc
agcgtccgccgcctgtccccggcggacggcccgctacggttggaattcgcggtgcaggac
accggcatcggcatcagtccggaccagcaggcgcaactgttccaaggcttcacccaggcc
gaggcctcgatcagccggcgcttcggcggcaccggcctgggcctggccatctgcaagcgc
ctggtggaactgatggacggcgagttgcaggtggagagccaattaggcgtgggcagccgc
ttctggttcgacgtcaccctggcggtggacagccagggcgaagccccactcgcgccggta
cgccgccgggtgctgctggccgacgacaataccctgatcggtcatttgctggtggaaact
ttggctgcgctgggctggcaggtggacctggtcaccagcggcgccgccgccctggcgcgg
atcgcccaggcgcagagccaggggcagccctatgaggccgtgctcatggactggcgcatg
cccgacggcgatggcttgcagagcgcacgccagttgcgcgcacagctatccgccaagcga
cccaaggtcatcatgctcaccggcttcggtcgcgactttctcagtgagacccagcagagc
gccgaggcgcccttcgacgactacctgatcaagccggtgaccccggcacagatcgtcgag
gcggtggagcgcgccctgggtgccgagatcccggccggggtgcacgccgcggcggcggtg
gacgaaagccaccggctggccggcctgcgcctgctggtggtggaagacaacgccctcaat
cgccaggtggccgccgagctgctgctggcccagggcgcccaggtggagctggcggagggt
ggcctggagggcgtcgagcgggtgctctccggcgcgccgctcgacgtggtcatcatggac
atgcagatgcccgacatcgacggcctggaagccactcgccgcattcgtgccgatggccgc
ttcagtaccctgccgatcctggcgatgaccgccaacgcctcccacaccgatcgcgacgcc
tgcctggctgccggcatggacgaccacatcggcaagcccatcgacctggaactgctggtc
agccggttgcagcgcctgaccggccaggaggtgacggctacgaccatggtcacctcggtc
ggcgtggagcgcgcggtggagccgttgagcgtcgtcctgcgccggttcggcggcgatgca
cggctgttcacttcgctgctcgaacgtttcgccgaagattcctcccagttgctggcggcc
ctggcgcaggcctggggggcggatgacaacgaaggcgcggtggccgtcctgcattcgctc
aagggtagcgccggcaccatgggtgcccagcgcctggcggctcgcgccgccgacggcgag
cgggcgggcaaggcgggcgctgggataccggcggatgtcgcggccgaactggggaccctg
cggctattgctcgacgaggccctcgccgagttgcgcagtgccctcgccgagcgcctgccg
ccaccaccggcccaaatcgccgctacgctggtagtggactggtccgcccgtttggacgaa
ctcgcgctcttgctcggccagggcaacctcgaagccctggaccggctggccgagctgccc
gagcagtgccgggccgaagcccaggtgcgctacgacctgttccgtgcccaggtcgagacg
ctcgattttgcggcagcccttacgaccctgcctgatctcaaggaagcgctatga
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integrated database retrieval system
