Pseudomonas oryzihabitans PRS08-11306: BJP27_11430
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Entry
BJP27_11430 CDS
T05074
Name
(GenBank) D-alanine--D-alanine ligase
KO
K01921
D-alanine-D-alanine ligase [EC:
6.3.2.4
]
Organism
ppsl
Pseudomonas oryzihabitans PRS08-11306
Pathway
ppsl00470
D-Amino acid metabolism
ppsl00550
Peptidoglycan biosynthesis
ppsl01100
Metabolic pathways
ppsl01502
Vancomycin resistance
Brite
KEGG Orthology (KO) [BR:
ppsl00001
]
09100 Metabolism
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
BJP27_11430
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
BJP27_11430
09160 Human Diseases
09175 Drug resistance: antimicrobial
01502 Vancomycin resistance
BJP27_11430
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
ppsl01011
]
BJP27_11430
Enzymes [BR:
ppsl01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.4 D-alanine---D-alanine ligase
BJP27_11430
Peptidoglycan biosynthesis and degradation proteins [BR:
ppsl01011
]
Precursor biosynthesis
Amino acid ligase
BJP27_11430
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Dala_Dala_lig_C
Dala_Dala_lig_N
CPSase_L_D2
ATP-grasp
ATP-grasp_4
RimK
GARS_A
ATP-grasp_3
ATPgrasp_YheCD
ATP-grasp_5
Motif
Other DBs
NCBI-ProteinID:
APQ12080
LinkDB
All DBs
Position
complement(2556817..2557830)
Genome browser
AA seq
337 aa
AA seq
DB search
MIKDKLKIAVLLGGTSEERDVSIASGAQVVAALRRRGHQVVTVDTALGLLDEDAERALLE
ARVGLEPPERTALVRMRGQDAGAVLSQAQLGDQDLLFLALHGGTGENGTLQTLLDLAELR
YTGSGRVGSAVAMDKDLSKRLFRAAGVPTADWLMAPVAAETVAETLGFPVIVKPSQQGST
VGLSKVSRAEDLQPAIELALRYDREVMIERFVAGRELTVGVLGDQALAVGEIVLGQSGVF
DYTSKYQPQGAVEVFPAEVSAEIAAEARRLALAAHRALKLDGYSRADFRLDAEGRLWCLE
VNTLPGMTATSLLPQSAAAVGIDFDELCERICRLALR
NT seq
1014 nt
NT seq
+upstream
nt +downstream
nt
atgatcaaggacaagctgaagatcgccgtcctgctcggcggcaccagcgaggaacgcgat
gtgtccatcgccagcggcgcccaggtggtggcggccctgcgtcggcgcgggcaccaggtg
gtgaccgtggacaccgccctggggctgctcgacgaggacgccgaacgggcgctgctggaa
gcccgggtcggtctcgaaccgccggagcggaccgctctggtgcggatgcgcggccaggac
gccggtgccgtgctcagccaggcgcaactgggcgaccaggatctgctgttcctcgcgctg
cacggcggtaccggtgagaacgggaccttgcagaccctgctcgatctggccgagctgcgc
tataccggtagcggccgcgtaggcagcgccgtggccatggacaaggacctcagcaagcgg
ttgttccgcgccgctggggtgcccaccgccgactggctgatggcgccggtggctgccgaa
accgtggccgagaccctcggtttcccggtgatcgtcaagcccagccagcagggctccacc
gtgggtctgagcaaggtcagccgcgccgaggacctgcagccagccatcgagttggcgctg
cgttacgaccgcgaggtgatgatcgagcgcttcgtcgccggtcgcgagctgaccgtgggg
gtcctgggtgaccaggccctggcggtgggcgagatcgtcctcggccagagcggcgtgttc
gactacaccagcaagtaccagccccaaggcgcggtggaagtgttccccgctgaggtatcg
gccgagatcgccgccgaggcgcgccggctggccctggctgcgcaccgggcgctcaagctc
gatggctacagccgcgccgatttccgcctggatgccgaggggcggctgtggtgcctggag
gtcaataccctgccagggatgaccgccaccagcctgctgccgcaatcggcggcggcggtc
ggcatcgatttcgatgagttgtgcgagcgcatttgccggctggctctgcgatga
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