Pseudomonas oryzihabitans PRS08-11306: BJP27_11685
Help
Entry
BJP27_11685 CDS
T05074
Name
(GenBank) sigma-54-dependent Fis family transcriptional regulator
KO
K21405
sigma-54 dependent transcriptional regulator, acetoin dehydrogenase operon transcriptional activator AcoR
Organism
ppsl
Pseudomonas oryzihabitans PRS08-11306
Brite
KEGG Orthology (KO) [BR:
ppsl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ppsl03000
]
BJP27_11685
Transcription factors [BR:
ppsl03000
]
Prokaryotic type
Helix-turn-helix
Other families
BJP27_11685
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_activat
Sigma54_activ_2
AAA_lid_14
HTH_8
AAA_5
HTH_23
PAS_4
PAS
AAA_2
HTH_17
HTH_30
HTH_29
AAA
PAS_9
HTH_3
Mg_chelatase
RWP-RK
PAS_7
ANT
HTH_Tnp_1
DUF7726
HTH_28
MCM
nSTAND3
HTH_7
IstB_IS21
HTH_22
Diguanyl_cycl_sensor
PAS_8
HTH_Tnp_1_2
nSTAND6
HTH_50
HTH_Tnp_ISL3
AAA_7
RsmI_C
MerR
IclR_C
AAA_16
Motif
Other DBs
NCBI-ProteinID:
APQ12128
LinkDB
All DBs
Position
complement(2611171..2613063)
Genome browser
AA seq
630 aa
AA seq
DB search
MPATPSDRHASQVLELARGAVLDGPASDPAIARSWRRCLDEHHLDPAARMAPWVLERARF
DEHRERQQRVLHIARGQMNSLHQQLGGAGHAVLLTDARGLILDCVTAEAEREIFQQAGLW
LGADWSEACEGTNGIGTCVVERQALTIHRDEHFRSRHTQLTCSASPVFDPAGELLAVLDV
STARQEASRQGQFHTMALVNLSAKLIESCYFLDRYADGYLLRFHAQAAYVGLLSEGLLAF
DGEGRISAANETALMLLGLARAAVVGQAMTDLFELRLDDLLERARPQPSACWALRGRQGQ
GFHGLVRGPQVRPVSPVAVPKPSTPSGICLGDPALARDFARALKVLERDVPVLLHGETGT
GKEAFASALHRASSRAGKAFVALNCAAIPETLIESELFGYRGGSFTGARKEGMAGKLQQA
DGGILFLDEIGDMPLALQTRLLRVLEERQVVPLGGGAPRALDLRLVSASHRDLDALVAAG
SFREDLYYRLRGLVVTLPALRDRSDHGALLDQLLAEEARGEPIHLDPAARACLLAQPWPG
NVRQLRTVLRTLVALSEDGRIGLDELPADCRTTAPRVPADRAPVDSAREELRAVLEDCHW
QMTRAAKRLGVSRNTLYRWLHQHGLQRPQD
NT seq
1893 nt
NT seq
+upstream
nt +downstream
nt
atgcccgccaccccgtccgatcggcatgccagccaggtgctcgaactcgcccgcggcgcc
gtcctcgatggtcccgccagcgatccagccatcgcccgctcctggcggcgttgtctcgac
gagcatcatctggatccggccgcccgcatggcgccctgggtattggaacgcgcgcgtttc
gacgagcaccgcgagcgccagcagcgcgttctgcacatcgcccgtggccagatgaattcg
ttgcaccagcaactgggcggcgccggccatgccgtgctgctcaccgatgcccgtggcctg
atcctcgactgcgtgaccgccgaggccgagcgcgagatcttccagcaagccggcctctgg
ctgggcgccgactggagcgaggcctgcgaaggcaccaatggcatcggtacctgcgtggtg
gagcgccaggcactgaccatccatcgcgacgaacacttccgcagccgccatacccagctc
acctgctcggccagcccggtgttcgatccggcgggcgagctgctggcggtgctggacgtt
tccaccgcccgccaggaggcctcgcgccaggggcagttccacaccatggcgctggtcaat
ctctcggccaaactgatcgagagctgctatttcctcgaccgctacgccgatggctatctg
ctgcgcttccatgcccaggcggcctatgtcgggttgctcagcgaggggctgctggccttc
gacggcgaagggcgcatcagcgccgccaacgagaccgccttgatgttgctcggcctggcc
cgcgcggcggtggtggggcaggcgatgacggacctgttcgagctgcgcctcgacgacctg
ctggagcgcgcccgaccgcaacccagcgcctgctgggcgctgcgcggacgccaggggcag
ggcttccatggcctggtgcgtgggcctcaggtgcgtccggtctccccggtggcggtgccc
aagccctccacacccagcggtatctgcctgggcgatccggcgctggcacgggatttcgcc
cgggcgctcaaggtcttggagcgtgatgtaccggtactgctgcacggcgagaccggcacc
ggtaaggaggccttcgccagcgccctgcaccgcgccagcagtcgcgctggcaaggccttc
gtcgccctcaattgcgcggccatcccggaaacgctcatcgagagcgagttgttcggctat
cgcggcggcagcttcaccggcgcccgcaaggaaggcatggccggcaagctgcaacaggcc
gacggcggcatcctctttctcgacgaaatcggcgacatgccgctggcgctgcagacgcgg
ctgctcagggtgctggaagaacgccaggtggtccccctcggtggtggtgccccgcgggcc
ctggatttgcgcctggtcagcgccagccaccgcgacctggacgccctggtggcggccggc
agctttcgcgaagacctctactaccgcctgcgcggcctggtggtgaccctgccggcgcta
cgcgaccgcagcgaccatggcgcgctgctcgaccaattgctggccgaagaggcacgcggc
gagcccatccacctcgatcccgcggcgcgcgcctgcctgctggcccagccctggcccggc
aacgtccgccagttgcgcaccgtgctgcgcaccctggtggccctgagcgaagacggccgg
atcggcctggacgagctaccggccgactgtcgtaccacggcgccccgcgtcccggctgac
cgggcaccggtcgacagtgcccgggaggagctgcgcgcggtgctggaggattgccactgg
cagatgacccgcgcggccaagcggctcggggtgagtcgcaataccctctatcggtggctg
catcagcacggtctgcagcgcccgcaggactaa
DBGET
integrated database retrieval system
