Pseudomonas oryzihabitans PRS08-11306: BJP27_12585
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Entry
BJP27_12585 CDS
T05074
Name
(GenBank) A/G-specific adenine glycosylase
KO
K03575
A/G-specific adenine glycosylase [EC:
3.2.2.31
]
Organism
ppsl
Pseudomonas oryzihabitans PRS08-11306
Pathway
ppsl03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
ppsl00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
BJP27_12585
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ppsl03400
]
BJP27_12585
Enzymes [BR:
ppsl01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.31 adenine glycosylase
BJP27_12585
DNA repair and recombination proteins [BR:
ppsl03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
BJP27_12585
Prokaryotic type
BJP27_12585
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HhH-GPD
NUDIX_4
HHH
HHH_5
HHH_8
RecR_HhH
EndIII_4Fe-2S
Motif
Other DBs
NCBI-ProteinID:
APQ12296
LinkDB
All DBs
Position
2800885..2801949
Genome browser
AA seq
354 aa
AA seq
DB search
MTDDAFGTAVLAWYDLHGRKDLPWQQAVTPYRVWVSEIMLQQTQVATVLGYFDRFMQALP
TVEALAAAPEDEVLHLWTGLGYYSRARNLHKAAKTVVERHGGEFPRSVEALAELPGIGRS
TAGAIASLSMNIRAPILDGNVKRVLARYTATPGYPGEPAVARRLWDVAERLMPHERVGHY
TQAMMDLGATLCTRSKPSCLLCPVKPGCRAHLLGQETDFPASKPRKTLPQRHTLMPLFVN
DDNAVLLQRRPSTGLWGGLWGPPEVADVGELEVLAERQGLTIDERQALPGLVHTFSHFQL
AIEPWLVQVDHRRHAVAEGDWLWYNLASPPRLGLAAPVQKLLKRAAQALKGEPA
NT seq
1065 nt
NT seq
+upstream
nt +downstream
nt
atgactgacgacgctttcggtaccgccgtactggcctggtacgacctgcacggccgcaag
gacctgccctggcaacaggccgtgacgccctatcgtgtctgggtctcggagatcatgctc
cagcagacccaggtcgccaccgtgctgggctatttcgatcgcttcatgcaggcgttgccc
accgtcgaggccctggccgccgcccccgaggacgaggtgctgcacctctggaccgggctc
ggctactacagccgcgcgcgcaacctgcacaaggccgccaagaccgtggtcgagcgccat
ggcggtgaattcccgcgcagcgtcgaagccctggccgagctgcccggcatcggccgctcc
accgccggcgccatcgccagcttgagcatgaacatccgcgcacccatcctcgacggcaac
gtcaagcgtgtcctggctcgctacaccgccacgcccggctacccaggcgaacccgccgtg
gcccggcgcctgtgggacgtggccgagcggctgatgccccacgagcgcgtcggccactac
acccaggcgatgatggacctgggcgccaccctctgtacccgcagcaaacccagctgcttg
ctatgcccggtcaagcccggctgccgtgcccatctgctgggccaggagaccgactttccc
gcctccaagccacgcaagacgctgccgcagcggcataccctgatgccgctgttcgtcaac
gacgacaatgccgtgctcttgcaacgccggccctccaccggtctctggggcggcctatgg
ggcccgccggaagtggccgacgtcggcgaactcgaagtcctggccgaacgccaggggctg
accatcgacgaacgccaggcgctgcccggcctggtgcacaccttcagccacttccaactg
gccatcgagccctggctggtgcaggtggaccaccgccgccacgccgtggccgagggcgac
tggctttggtataacctcgcctccccgccgcgcctgggcctcgccgccccggtgcagaaa
ttgctcaagcgcgccgcgcaggcgctcaaaggagaacccgcatga
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