Pseudomonas oryzihabitans PRS08-11306: BJP27_12950
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Entry
BJP27_12950 CDS
T05074
Name
(GenBank) AsnC family transcriptional regulator
KO
K03719
Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein
Organism
ppsl
Pseudomonas oryzihabitans PRS08-11306
Brite
KEGG Orthology (KO) [BR:
ppsl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ppsl03000
]
BJP27_12950
03036 Chromosome and associated proteins [BR:
ppsl03036
]
BJP27_12950
Transcription factors [BR:
ppsl03000
]
Prokaryotic type
Helix-turn-helix
Lrp/AsnC family
BJP27_12950
Chromosome and associated proteins [BR:
ppsl03036
]
Prokaryotic type
Nucleoid associated proteins
Other nucleoid associated proteins
BJP27_12950
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HTH_24
AsnC_trans_reg
HTH_AsnC-type
MarR
NirdL-like_HTH
HVO_A0114
MarR_2
HTH_11
HTH_Crp_2
HTH_20
GntR
DUF7343
LexA_DNA_bind
DUF6262
WHD_MCM4
DDRGK
Fe_dep_repress
WHD_DUF6293
HTH_IclR
HTH_Tnp_Tc3_2
Sigma70_r4
HxlR
HTH_47
Motif
Other DBs
NCBI-ProteinID:
APQ12359
LinkDB
All DBs
Position
2875656..2876144
Genome browser
AA seq
162 aa
AA seq
DB search
MRTHHQARRELDKIDRNILRILQEDGRISFTELGERVGLSTTPCTERVRRLEREGIIQGY
NARLNPQHLRAGLLVFVELSLDYKSGDTFEEFRRAVLKLPQVLECHLVSGEFDYLVKARI
SEMASYRKLLGDILLKLPHVRESKSYIVMEEIKETLSLPVPD
NT seq
489 nt
NT seq
+upstream
nt +downstream
nt
atgcgtacccatcaccaggccagacgcgagctggacaagatcgaccgcaacatcctgcgc
atcctccaggaagacgggcgcatctccttcaccgaactgggcgagcgggtggggctgtcc
accacgccctgtaccgagcgcgtccgccggctggagcgcgagggcatcatccagggctac
aacgcccgcctcaatccgcagcacctcagggccggcctgctggtattcgtcgagctgagc
ctggactacaagtccggcgacaccttcgaggaattccgccgcgccgtgctcaagctaccc
caggtgctggaatgtcacctggtctcgggtgagttcgactacctggtcaaggcgcgtatc
tcggagatggcctcctaccgcaagctgctcggcgacatcctgctcaagctgccccatgtg
cgcgaatccaagagctacatcgtgatggaagagatcaaggagaccctgagtctgccggta
ccggattga
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integrated database retrieval system
