Pseudomonas oryzihabitans PRS08-11306: BJP27_14215
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Entry
BJP27_14215 CDS
T05074
Name
(GenBank) DNA gyrase subunit B
KO
K02470
DNA gyrase subunit B [EC:
5.6.2.2
]
Organism
ppsl
Pseudomonas oryzihabitans PRS08-11306
Brite
KEGG Orthology (KO) [BR:
ppsl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
ppsl03032
]
BJP27_14215
03400 DNA repair and recombination proteins [BR:
ppsl03400
]
BJP27_14215
Enzymes [BR:
ppsl01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
BJP27_14215
DNA replication proteins [BR:
ppsl03032
]
Prokaryotic type
DNA Topoisomerases
BJP27_14215
DNA repair and recombination proteins [BR:
ppsl03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
BJP27_14215
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_gyraseB
GyrB_insert
DNA_gyraseB_C
Toprim
HATPase_c
GyrB_hook
HATPase_c_3
Plant_all_beta
Motif
Other DBs
NCBI-ProteinID:
APQ12601
LinkDB
All DBs
Position
complement(3147548..3149968)
Genome browser
AA seq
806 aa
AA seq
DB search
MSETNTYDSSSIKVLKGLDAVRKRPGMYIGDTDDGTGLHHMVFEVVDNSIDEALAGFCSE
ISITIHMDESITVRDNGRGIPVDIHKEEGVSAAEVIMTVLHAGGKFDDNTYKVSGGLHGV
GVSVVNALSEELRLTIRRAGQVWEQVYVHGVPQAPLAVIGETDSTGTQVHFKPSAATFNN
IQFSWDILAKRIRELSFLNSGVGILLRDERTGKEELFKYEGGLRAFVDYLNTNKSAVNQV
FHFQVQREDDGVGVEVALQWNDSFNENILCFTNNIPQRDGGTHLAGFRSALTRNLNNYIE
AEGLAKKFKVATTGDDAREGLTAIISVKVPDPKFSSQTKDKLVSSEVKTAVEQEMGKHFS
DFLLENPNEAKAVVGKMIDAARAREAARKAREMTRRKGALDIAGLPGKLADCQEKDPALS
ELYIVEGDSAGGSAKQGRNRRTQAILPLKGKILNVEKARFDKMLSSQEVGTLITALGCGI
GREEFNIDKLRYHNIIIMTDADVDGSHIRTLLLTFFFRQMPLLIERGYIYIAQPPLYKVK
RGKQEQYIKDDEAMEEYLTQTALEEASLHVNENAPGLSGVELEKLVNNYRQVMKTFKRLS
RLYPADISEHLLYLPRVGLEQLGDEAAMRQWLAGFEARLKTAERNGTTYTISLREDRERS
LWLPEVETRAHGLSSYVTFNRDFFGSNDYRLVTELAAQLDNLLEEGAYAKRGERRRPVST
FKEAWEWLMNETSKRFNIQRYKGLGEMNPDQLWETTMDPNVRRMLKVTIEDAIAADQIFN
TLMGDQVEPRRDFIESNALAVSNLDV
NT seq
2421 nt
NT seq
+upstream
nt +downstream
nt
atgagcgagaccaatacctacgactcttccagcatcaaggtgctgaagggactggatgcc
gtgcgcaagcgccccggcatgtacatcggtgacaccgatgacggcaccggcctgcaccac
atggtcttcgaagtggtggataactccatcgacgaggccctggccggtttctgcagcgaa
atcagcatcaccatccacatggatgaatccatcaccgtgcgcgacaacggccgcggcatc
ccggtggatatccacaaggaagaaggcgtttcggcagccgaggtcatcatgaccgtgctg
cacgccggcggtaaattcgacgacaacacctacaaggtgtccggtggcctgcacggcgtg
ggcgtctcggtggtgaacgccctgtccgaagagctgcggctgaccattcgccgcgccggc
caggtgtgggagcaggtctatgtgcacggcgtacctcaggcccccctggcggtgatcggc
gagaccgacagcaccggtacccaggtgcacttcaagccgtcggccgcgaccttcaacaac
atccaattcagctgggacatcctggccaagcggatccgcgagctgtccttcctcaactcg
ggcgttggcatcctcttgcgtgacgagcgtaccggcaaggaagagctgttcaagtacgaa
ggcggcctgcgtgccttcgtcgactacctgaacactaacaagagtgcggtgaaccaggtg
ttccatttccaggtgcagcgcgaagacgatggcgttggcgtggaagtggccctgcagtgg
aacgacagtttcaacgagaacatcctctgcttcaccaacaacatcccgcagcgcgacggc
ggcacccacctggccggcttccgctcggcgctaacgcgtaacctgaacaactacatcgag
gccgagggcctggcgaagaagttcaaggtcgccaccaccggtgacgatgcccgcgaaggc
ctgaccgccatcatctcggtcaaggtgccggaccccaagttctcctcccagaccaaggac
aagctggtctcttccgaggtgaagaccgcagtggaacaggagatgggcaagcatttctcc
gacttcctgctggagaaccccaacgaagccaaggcggtggtcggcaagatgatcgacgcg
gcgcgcgctcgtgaggcggcgcgcaaggcgcgggagatgacccggcgcaagggcgccctg
gacatcgccggcctgccgggcaagctggcggactgccaggaaaaggacccggcgctgtcc
gaactctacatcgtggagggtgactctgccggtggttcggccaagcagggccgcaaccgg
cgcacccaggcgatcctgccgctcaagggcaagatcctcaacgtggagaaggcgcgcttc
gacaagatgctctcttcccaggaagtgggcaccctgatcaccgcgctgggctgcggtatc
ggtcgcgaagaattcaacatcgacaagctgcgctaccacaacatcatcatcatgaccgat
gccgatgtggacggttcgcacatccgtaccctgctgctgaccttcttcttccgccagatg
ccgctgttgatcgagcgtggctacatctacatcgcccagccgccgctgtacaaggtgaag
cgtggcaagcaggagcagtacatcaaggatgacgaggcgatggaggaatacctgacccag
accgccctcgaagaagccagcctgcacgtcaacgagaacgccccgggcctgtccggcgtg
gaactcgagaagctggtgaacaactaccgccaggtgatgaagaccttcaagcgcctgtcg
cgcctctacccagccgacatcagcgagcacctgctgtacctgccccgcgtgggcctggag
cagctgggcgacgaggcggccatgcgccagtggctggccggcttcgaggcacgcctgaag
accgccgagcgtaacggcaccacctataccatcagcctgcgcgaggatcgcgagcgcagc
ctttggctgccggaagtcgagacccgcgcccatggcctgtccagctacgttaccttcaat
cgggacttcttcggcagcaacgattaccgcctggtgaccgaactggccgcccagctggac
aacctgctggaagaaggtgcctacgccaagcgcggcgaacgccggcgcccggtcagcacc
ttcaaggaagcctgggaatggctgatgaacgagaccagcaagagattcaacatccagcgc
tataagggcctgggtgagatgaatccggatcagctgtgggaaaccaccatggacccgaac
gtgcgccgcatgttgaaggtaaccatcgaggacgctatcgccgccgaccagatcttcaac
accctgatgggggatcaggtggagccgcggcgcgacttcatcgagagcaatgccctggcg
gtttccaacctcgacgtctga
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