Pseudomonas oryzihabitans PRS08-11306: BJP27_14395
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Entry
BJP27_14395 CDS
T05074
Name
(GenBank) transcriptional regulator
KO
K19337
RpiR family transcriptional regulator, carbohydrate utilization regulator
Organism
ppsl
Pseudomonas oryzihabitans PRS08-11306
Brite
KEGG Orthology (KO) [BR:
ppsl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ppsl03000
]
BJP27_14395
Transcription factors [BR:
ppsl03000
]
Prokaryotic type
Helix-turn-helix
Other families
BJP27_14395
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HTH_6
SIS
HTH_Tnp_ISL3
Motif
Other DBs
NCBI-ProteinID:
APQ12636
LinkDB
All DBs
Position
3185517..3186386
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AA seq
289 aa
AA seq
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MNLMQHIAQSRHLLRKSELKVAEQVMVDPAAVMHSSMADLAHNVGVSEPTIVRFCRAIGC
DGFQDLKLRLAQSLAAGASFGQFAIHENDAVEDFSLKIFDTTLHTLMDVRERLDMRALEQ
AIEAIAKAQRVMFYGFGASGSVANDAQHKFFRLQLSATAYSDPHMQAMSAATLTPSDAAI
CISQSGRSKDLLITANLVRDNGAALITICPGQTPLADLSTVNIAIDVHEDTDIYVPLTSR
IAHLVVIDVLAMGVAMSRGPALVEHLKSVKRSLRSLRLSSKSTKHSDTQ
NT seq
870 nt
NT seq
+upstream
nt +downstream
nt
gtgaacctcatgcaacacattgctcaatcccgccacctgctgcgcaagtcggagctcaag
gtcgccgagcaggtcatggtggatccggcagcggtcatgcacagctccatggccgatctc
gcccacaatgtcggcgtgagcgagcccaccatcgtgcgcttctgccgggccatcggctgc
gatggtttccaggatctcaagctgcgcctggcgcagagcctggcggcgggggccagtttt
ggccagttcgccatccatgagaacgatgcggtggaagacttcagcctgaagatcttcgac
accaccctgcatacgctgatggacgtccgcgagcggctggacatgcgcgcccttgagcag
gccatcgaggccatcgccaaggcccagcgggtgatgttctatggctttggcgcctcgggc
tcggtggccaacgacgcccagcacaagttctttcgcctgcagctcagcgccaccgcctat
tccgatccacacatgcaggccatgtcggcggcgaccctgacaccgtccgatgcggccatc
tgcatttcccagtcggggcgctccaaggacctgttgatcaccgccaatctggtgcgcgac
aacggcgctgccctgatcaccatctgcccggggcagacgccgctggccgatctgtccacg
gtgaacatcgccatcgatgtgcacgaggacaccgacatctatgtgcccctgacctcgcgc
atcgcccacctggtggtgatcgatgtgctggccatgggcgtggccatgtcacgcgggccg
gcgctggtcgagcacctcaagagcgtgaagcgcagcttgcgcagcctgcgcctgtcgtcg
aaatcgaccaagcacagcgacacccaatag
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