Pseudomonas oryzihabitans PRS08-11306: BJP27_16325
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Entry
BJP27_16325 CDS
T05074
Name
(GenBank) poly(A) polymerase
KO
K00970
poly(A) polymerase [EC:
2.7.7.19
]
Organism
ppsl
Pseudomonas oryzihabitans PRS08-11306
Pathway
ppsl03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
ppsl00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
BJP27_16325
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ppsl03019
]
BJP27_16325
Enzymes [BR:
ppsl01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.19 polynucleotide adenylyltransferase
BJP27_16325
Messenger RNA biogenesis [BR:
ppsl03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Others
BJP27_16325
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PolyA_pol_arg_C
PolyA_pol
PolyA_pol_RNAbd
Motif
Other DBs
NCBI-ProteinID:
APQ12996
LinkDB
All DBs
Position
complement(3637011..3638402)
Genome browser
AA seq
463 aa
AA seq
DB search
MLKKLIQTLRSPLRRTPPAPALPIELPRSQHALERERISRNALGVVDRLEKAGYQAYLVG
GCVRDLLLGFTPKDFDVATSATPEQVRAEFRNARVIGRRFKLVHVHFGREIIEVATFRAN
HPTGDAEDDAQGSRHESGRILRDNIYGNQEQDAQRRDFTINALYYDASGERILDYANGAQ
DIRLRQIRLIGDPEQRYLEDPVRMLRAVRFAAKLDFQIEAATAEPIVRLAPLLRDIPAPR
LFDEVIKLLLGGKAERTFELLCQYGLFAPLFPASGEALERDPEYAGSLIRQALANTDARI
REGKPVTPAFLFAALLWPALPERVRYHQERGLPPIPAMQEAAHDLTQQQCQRTAVPKRFT
LPMREIWDMQERLPRRQGKRADQLLENPRFRAGYDFLLLRESAGEETGGLGEWWTRYQEV
GDSQRREMIKNLSREEGAPAKRRRRGGSSRKRRTSDAPSSGDE
NT seq
1392 nt
NT seq
+upstream
nt +downstream
nt
atgctgaagaagctgatccagaccctgcgctcgcccctgcgacgtaccccgcccgcccct
gccttgcccattgaactgccgcgcagtcagcatgctctggaacgagagcggatcagtcgc
aacgccctcggcgtggtcgaccggctggagaaggccggctaccaggcctatctggtcggc
ggttgcgtacgggatctgctgctgggcttcacccccaaggatttcgacgtggccaccagc
gccacgcctgaacaggtccgcgccgaattccgtaatgcccgcgtgatcggccggcgcttc
aagctggtccatgtgcacttcggccgcgaaatcatcgaggtcgccaccttccgcgccaac
catccgacgggcgatgccgaggatgatgcccagggttcgcgccacgagagcggccggatc
ctgcgtgacaacatctacggcaaccaggaacaggatgcccagcgccgcgacttcaccatc
aacgcgctctactacgatgccagtggcgaacgcatcctcgactacgccaatggcgcccag
gacatccgcctgcggcagatccgcctgatcggcgatcccgagcaacgttacctggaagat
ccggtacggatgctgcgcgccgtgcgcttcgccgccaagctggacttccagatcgaagcc
gccaccgccgaacccatcgtccgtctggcgccgctgctacgggacatcccggccccccgg
ctgttcgacgaagtgatcaagctgctgctcggcggcaaggccgagcgcaccttcgagttg
ctctgccaatacggcctgttcgcgccgctgttccccgccagtggcgaggccctggagcgc
gatcccgagtacgccggtagcctgatccgccaggcgctggccaacaccgatgcgcgcatc
cgcgaaggcaagccggtcaccccggctttcctgttcgccgcgctgctctggccggcgctg
cccgagcgcgttcgctatcaccaggagcgtggcctgccgcccattccggccatgcaggaa
gccgcccatgacctgacgcagcagcagtgccaacggaccgccgtacccaagcgcttcacc
ctgcccatgcgggagatctgggacatgcaggagcgcctgccgcgccgccagggcaagcgc
gccgatcaattgctggagaatccgcgctttcgcgccggctacgacttcctgctgctgcgc
gagagcgccggcgaggaaaccggcggcctgggtgaatggtggacccgctaccaggaagtc
ggcgacagccagcggcgcgagatgatcaagaacctgagccgcgaagaaggtgcccctgcc
aagcgtcgtcgccgcggcggcagcagtcgcaagcggcgcacctccgatgcgccctcgtcc
ggcgacgaatga
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